Protein

Protein accession
1jBm2 [EnVhog]
Representative
3dQGl
Source
EnVhog (cluster: phalp2_4467)
Protein name
1jBm2
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSTVEKRIWDYLIAKGLSAAGAAGLMGNLYAESGLNPQNLQNTYEKKLGYADAVYTAAVDSGEYKNFVHDSAGYGLAQWTYWSRKQNMLGFAQAAGKSIGDLDMQLDFLFTELSNGYKSVLSTLKSATAVRTASDSVLLNFERPANQGEAVKIKRAQYGQVYYDKYAKPENGGNDMSNSSLVSYTKLSPNHSGQRTHSIDRITPHCVVGQCSVETLGNIFLPTSRQASCNYGIGPDGRVGMYVEEKNRSWCSSSNANDQRAVTIECASDATAPYAFKDVVYQKLIDLCVDICKRNGKKKLLWLGDKTKTLNYTPKSDEMVLTVHRWFANKSCPGDWMYARMGDLASKVTAKLGGSAVSPVTPSNPSTFEPSNPSTGLDVGAVVNFAGGKHYVSANAASGSTAKAGPAKITALSANAKHPYHLIHTDATSNVYGWVNADDISAVGSSAAVTNSRVRITTADLNIRSGPGTNFARKGSIKPGVYTIVEESAGAGASKWGKLKSGVGWVSLDYCTKL
Physico‐chemical
properties
protein length:514 AA
molecular weight:55171,4 Da
isoelectric point:9,05
hydropathy:-0,33
Representative Protein Details
Accession
3dQGl
Protein name
3dQGl
Sequence length
429 AA
Molecular weight
47939,88480 Da
Isoelectric point
7,68414
Sequence
VATNEEVIWSFLYDKIGNAYGVAGLMGNLYAESALKPTNLQNNFETKLGYSDASYTAAVDNGVYKNFTMDGAGYGLAQWTYRTRKAALLAYTQAQGKSIGDLDTQLAFLWKELHENFATVVKTLKSAKSVKEASNAVLLKFEAPKDQSEKVQALRASYGQAYYDKYAIAPMSEEEKIMADLGIINMPAHSTNQWYRNGNKIQYIVMHYVGAVSTAKNNGSYYGNTANIGASAHYFVDENHIVASVPEIMSAGHCGVDYSGGKAPFWGKCTNKNSIGIEMCCKKTASGQWYIEPATVTKSVALVKWLMAKYGIDAAHVVRHYDVCYKRCPEPWVRDAAQWADFKRRISEEEIDMTKAEVKDMVKEIVTEMLTGANTEPSDWAKKEMGEHLEDVKHITDGTRPRGYTKREETAAMVRRAEKRLMAKIEELK
Other Proteins in cluster: phalp2_4467
Total (incl. this protein): 291 Avg length: 478,0 Avg pI: 7,89
Protein ID Length (AA) pI
3dQGl 429 7,68414
13Acj 490 5,09456
13rqi 483 8,18080
13yro 504 8,64471
196z6 470 7,99100
1GM38 523 8,59178
1GcpF 478 6,67622
1kdHm 508 9,09057
1m5nv 435 8,68958
1nhfi 446 5,55711
1nlMH 478 8,89646
1oaRN 446 5,94743
1oejR 444 9,38764
2Ttyp 526 8,25977
2XK13 497 9,25310
2lHeW 478 6,67610
2nTnd 523 8,59178
2ohIm 527 8,59178
3PPhm 508 8,88627
3Q3vx 483 7,49873
3fKus 441 5,11349
3l5Yu 478 7,61815
3myRk 446 6,36804
3nJOK 516 9,10089
3nWBK 518 8,85333
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2871
nzhm
 23 49,2% 262 1.091E-113
2 phalp2_2557
6ucjN
 5 45,1% 321 7.962E-92
3 phalp2_30431
7DEWH
 4 34,0% 311 2.524E-75
4 phalp2_11795
85Kwh
 1 29,5% 335 6.520E-53

Domains

Domains
Phage_lys2
Ami2
Unannotated
Representative sequence (used for alignment): 3dQGl (429 AA)
Member sequence: 1jBm2 (514 AA)
1 429 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510, PF18013

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (3dQGl) rather than this protein.
PDB ID
3dQGl
Method AlphaFoldv2
Resolution 93.01
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50