Protein

Protein accession
1jCDk [EnVhog]
Representative
3o9d4
Source
EnVhog (cluster: phalp2_13292)
Protein name
1jCDk
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MMKSSELVAKVVDIAKHYKTLYVMGCFGAPLTATNKTRYTKNHTYNMAAARTAMIMAATPDTFGFDCVNLIKAVLWGWTGDKTKAYGGAKYAVNGVPDIGADTMIAKCKDASASGWGNLDPGEVVWTTGHIGVYIGNGLAVECSPRWENKVQITAVGNIGAKNGYNTRTWKKHGHLPYVIYDKTVTPTQPETVKPAPVTEVKAKGVARSFNKAVAGAYTVTAGSGLNVRDAAGTDSKVLVIIPKGTIVRNYGYYTVVNGVKWLYVTFSYKRVNYTGFVSERFLSR
Physico‐chemical
properties
protein length:285 AA
molecular weight:30906,2 Da
isoelectric point:9,64
hydropathy:-0,13
Representative Protein Details
Accession
3o9d4
Protein name
3o9d4
Sequence length
287 AA
Molecular weight
31221,14900 Da
Isoelectric point
9,51568
Sequence
MSTVMKASEFVNKLKDVATNYKTLYVMGCFGAPMTDANKERYCKNHSYNTSANRTKLIKAASADTFGFDCVCLIKGVLWGWNGNTNKVYGGAEYASNGVKDVSADGMINLCSNVTTDFSKIEVGEAVWCKGHIGVYIGDGLAVECTPAWKNRVQITAVKNIGTKSGYNARNWTKHGKLPYIKYDVTTTSATTSKPVTSTSSNTSVKIDYAQKMDKSLGGQYIITAESGLHIRTGAGTNKKSLGVLKKGTVVTNYGYYSVDNKGTKWLYVRTSNNASGFCSSKYLRKS
Other Proteins in cluster: phalp2_13292
Total (incl. this protein): 478 Avg length: 260,5 Avg pI: 9,17
Protein ID Length (AA) pI
3o9d4 287 9,51568
11iJM 296 7,51607
138KN 302 9,52947
13Hzi 240 8,47342
13a4J 295 9,69690
1FHwH 307 9,15311
1GUnk 286 5,37301
1Gh67 268 9,16291
1GnlN 204 7,61065
1Gr7G 271 9,28952
1Ixmn 230 8,68707
1ecr5 252 6,20820
1fZKm 256 8,74670
1gF7X 253 8,64697
1k7sZ 232 8,82967
1kc4a 233 9,05563
1mfya 285 9,57770
1ocxz 286 9,37385
23D37 327 7,53369
23Ifh 264 8,11117
23ici 260 9,02965
23sYx 364 9,33613
23txn 241 9,43103
24M6Y 292 9,54727
2EWR 285 9,63720
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_29540
3v8t1
 106 71,2% 198 9.006E-105
2 phalp2_16170
4yiWs
 67 75,5% 180 2.094E-103
3 phalp2_16010
3o4Sp
 262 68,0% 200 3.252E-98
4 phalp2_13986
nz3U
 16 68,6% 188 4.577E-89
5 phalp2_20477
3TDR4
 13 54,7% 190 2.743E-78
6 phalp2_3306
2Vjdq
 8 58,3% 180 1.318E-77
7 phalp2_23023
3WCn5
 1 44,6% 269 2.469E-77
8 phalp2_4073
1kIeM
 1 34,6% 280 5.489E-64
9 phalp2_13101
8tQAx
 63 39,7% 186 1.653E-43
10 phalp2_34755
3gjml
 29 35,3% 198 6.890E-42

Domains

Domains
Unannotated
SH3_3
Representative sequence (used for alignment): 3o9d4 (287 AA)
Member sequence: 1jCDk (285 AA)
1 287 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF08239

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (3o9d4) rather than this protein.
PDB ID
3o9d4
Method AlphaFoldv2
Resolution 89.58
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50