Protein

Protein accession
1nmfW [EnVhog]
Representative
3v8t1
Source
EnVhog (cluster: phalp2_29540)
Protein name
1nmfW
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MITSNEFTQKLIDAAKNHKTVYANGMFGHLITEEIISQKAQQLPGWYTASRQADLRELIGKEYFGFDCVCLVKGILWGWNGDVSKKYGGAVYQSNGVPDITEGQMIDACNGVSSDFSSLVPGEFLWMQGHCGVYIGDGLAVECTPKWDNCVQITAVGNIGSKSGYNSRTWTKHGKLPYVEYVQAGHEIAAGDLVKIASDAEYYGGAAMPAWVKDQNWYVKSRDGDRAVIDQNEAGTNSIDSPVDVKYLTLVGSAEAEPEPVPAADTVTVELLTLRRGENRGNTQIGTVQTILKAAGLYTMDVDNSYGPGTETAVKKFQAAKGLDADGVVGIDTWTALLGG
Physico‐chemical
properties
protein length:340 AA
molecular weight:36641,7 Da
isoelectric point:4,85
hydropathy:-0,23
Representative Protein Details
Accession
3v8t1
Protein name
3v8t1
Sequence length
314 AA
Molecular weight
33963,54610 Da
Isoelectric point
9,57260
Sequence
MMKSTDFIAKLKDIATNYKTLYVMGCFGAPMTSSNKKRYTNNHTYNKQAARTKMINAASADTFGFDCVCLIKGVLWGWCGNANKTYGGAGYAINGVPDIGADTMITKCSGVSTNFANIVPGEAVWMPGHIGVYIGNGLAVECTPKWENKVQITAVGNIGKKTGYNTRTWTKHGKLPYVEYVAEQQPVQQPVQQPVVTPTASAFKAGDEVKITGNTYYNGGTIPSWVKAKNWIVYSVSGDRVVINKSVDGKNAIMSPVKASNLALVSSSTTKTVEQLAREVIQGKWGNGATRKKRLTEAGYSYAAVQAKVNELLK
Other Proteins in cluster: phalp2_29540
Total (incl. this protein): 106 Avg length: 295,8 Avg pI: 8,77
Protein ID Length (AA) pI
3v8t1 314 9,57260
13b2k 290 9,71553
13egI 266 7,09484
1NxyR 255 6,33126
1cBXU 325 7,65203
1cLU0 321 7,00350
1daCR 263 9,27515
1ktzW 308 9,21713
23ML5 342 7,02407
24nuS 340 4,89090
2m3Fg 285 9,59775
2o9FL 298 9,68401
3TRX7 271 9,91880
3TRzv 299 9,07085
3VMfK 280 9,36166
3WNSS 280 9,38758
3caeN 248 8,07184
3dUQW 247 8,20678
3gJat 260 9,72855
3gTAi 342 6,10442
3j3rv 302 4,21878
3l5vk 253 9,49170
3lXa1 291 9,69658
3pS2e 285 9,55636
3q0XX 286 9,52367
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_16010
3o4Sp
 262 65,9% 238 1.112E-104
2 phalp2_13292
3o9d4
 478 67,1% 192 3.934E-101
3 phalp2_20477
3TDR4
 13 51,2% 195 1.999E-71
4 phalp2_13101
8tQAx
 63 37,1% 253 4.097E-48
5 phalp2_24045
8beMs
 3 34,4% 215 2.210E-41
6 phalp2_14276
3nzpp
 1 33,9% 212 4.226E-39
7 phalp2_5558
3TF5R
 6 27,5% 309 4.226E-39
8 phalp2_39901
1gGC5
 22 33,4% 203 1.481E-36
9 phalp2_14326
3ZXZ8
 9 25,4% 259 3.421E-26
10 phalp2_7408
4FRdP
 29 23,1% 470 3.866E-25

Domains

Domains
Unannotated
Unannotated
CW_7
Representative sequence (used for alignment): 3v8t1 (314 AA)
Member sequence: 1nmfW (340 AA)
1 314 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF08230

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (3v8t1) rather than this protein.
PDB ID
3v8t1
Method AlphaFoldv2
Resolution 87.47
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50