Protein

Protein accession
1r5YK [EnVhog]
Representative
3tdUS
Source
EnVhog (cluster: phalp2_15741)
Protein name
1r5YK
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MIKMKKGIDISYWQGTVDFNKVKADGIKFVLLREGYRKTVDTRFFEYVKGCKAAGIPVLGVYHFSYALNITQAKEEAAFCIKQVKKAGLDKNTIIFFDFEYDTVKKAKSAGVTLDKDDCIAHSKAFCEYVEEQGYKAGIYANIDYYKNWYSKELINKYRFWLADYSGDADYPCLFQQYSSKGKVNGISGNVDMNYYFGEESNTVSKTDIVQQVIDDAVDFAVRMAKDNTHGYSQSTRSLYNITNPKSFDCSSLVCTAFYYAFVTNGLTEAATYLKNNCSYTGNMLKMTNCGFEIVAKNQTAHAAMKKGDIELNTTYHTALAIDSDNIVHARSSEGTKDTKDGSGNEIRTQPWYLYSHGWTHRLRFTGKGLNLSGTKKSSATTTTTTGGTNYMFEPKTVQYGSTGTSVLLLQEILKARGYTDSNGKVLELDQSAGNATVSALKKYQKERGLEVDGICGSATWTDLIAI
Physico‐chemical
properties
protein length:467 AA
molecular weight:52098,1 Da
isoelectric point:8,43
hydropathy:-0,41
Representative Protein Details
Accession
3tdUS
Protein name
3tdUS
Sequence length
604 AA
Molecular weight
67947,53260 Da
Isoelectric point
9,32195
Sequence
MESRQMIIQSVMQVLKSKVDQETLDIVQDALTIELNRYEVQERTTELSVVDNSAVGMLRRYIATKRIEGKAEFTLKRYWEQNLQLICQESEQHHKALIFAQICAGAMPRKDKNMELKGIDVSSWQGKIDWNKVANYGMDFAILRITEAGNVIDGQFENNFAGCNKYKIPVGVYKYSYASTVSEARSEARKVVSVLNGRKIQFPVFLDLENHRQRVLGAESIHNLAEAFREIIVAAGYKFAIYCNLDWYMNVICSHLKKHDFWIARYPANDNGTVVERLRPSWGVGWQYSSKATIPGINTKVDRNIFYKDYTEAKESGTMAKTKEQIIQNVKNDAVSFAVNIANDNSHGYSQRIRSLYEINIPKSFDCSSLALTAYYYAFLKNGLTKQARYLKENCSYTGNMLKMLNAGFEVVARNQTAHKQMIKGDLELADNNPNGSNSHVAMAIGKNDIVHARSSEGTKDTKDNSGNEIRTQPWYLYSHGWTHRLRFTGKGIDFSGLTNTTGSKPTAKPSTSTKPSTTTSKGAGYMFEPKLVKLGSEGTSVLLLQEILIARGFKGKNGKALSLSRKADANTIYALKQYQKSRNGVLSVDGECGKNTWKDLIAI
Other Proteins in cluster: phalp2_15741
Total (incl. this protein): 229 Avg length: 478,7 Avg pI: 8,58
Protein ID Length (AA) pI
3tdUS 604 9,32195
1kdJY 477 8,46884
1mc3O 477 8,66121
1nT25 484 8,21335
1o07v 477 8,46504
1o5v8 477 8,74593
1o8bM 477 8,74593
21pMx 464 5,15918
24F1t 510 4,79343
2ep6 455 7,78954
2lYOP 491 9,23937
2lt1H 491 9,23318
2mc5T 491 9,25729
2mfK3 477 8,68881
3B2kn 477 8,74593
3B4PA 477 8,57193
3ITxt 477 8,74593
3TCY3 470 8,86203
3TFc7 452 8,76675
3VJtF 455 8,07236
3WBOk 443 8,86971
3WMoy 459 6,03917
3dZEs 545 4,84299
3gauz 470 4,99952
3iBCq 603 5,92122
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_16417
6gC98
 231 41,1% 394 3.261E-111
2 phalp2_34762
3ij83
 364 35,7% 445 3.134E-97
3 phalp2_4916
6k3vw
 208 29,5% 528 6.924E-74
4 phalp2_2377
7JCYq
 91 26,0% 503 3.181E-73
5 phalp2_1872
3VMqM
 12 25,2% 543 4.681E-50
6 phalp2_34377
4dm6y
 15 23,3% 569 3.544E-45
7 phalp2_24001
41ivD
 4 26,1% 444 6.384E-45
8 phalp2_17564
66E2C
 6 23,0% 439 5.791E-40
9 phalp2_14277
3nL7u
 72 28,2% 386 4.436E-39
10 phalp2_1509
21BcC
 2 22,4% 530 4.604E-33

Domains

Domains
Unannotated
Unannotated
GH25
Unannotated
Unannotated
Representative sequence (used for alignment): 3tdUS (604 AA)
Member sequence: 1r5YK (467 AA)
1 604 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (3tdUS) rather than this protein.
PDB ID
3tdUS
Method AlphaFoldv2
Resolution 80.25
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50