Protein

Protein accession
1rt2U [EnVhog]
Representative
8pawf
Source
EnVhog (cluster: phalp2_21492)
Protein name
1rt2U
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MDRNFKVSLKEVLKHEGGWSDHPSDPGGATMKGVTIATFRAFVNPKGTKDDLRKITDAQLETVYRRQYWDKVHGAELPDGVDFVTFDYSVHSGPTRAVKDLQKVVGVSQDGKIGPKTLEAIKSMGSRNVINKLCDTRLAFLKRLKTWPTFGKGWSRRVAGVRDFALGLSSNPTPERPAVITKEVEKPIVPSSVDSQVKKKFSLAGWLGTIFSSGGIGALGLAGFGWRELIALGAVAVAVLLGGLALRGWIVKAIKDIRKELDDA
Physico‐chemical
properties
protein length:264 AA
molecular weight:28726,8 Da
isoelectric point:9,81
hydropathy:-0,19
Representative Protein Details
Accession
8pawf
Protein name
8pawf
Sequence length
216 AA
Molecular weight
23837,13760 Da
Isoelectric point
9,42542
Sequence
MKDNFEACCSFVRSQEGGFVDDPHDPGGRTMEGITQITYHDAGLKVNVKGITTAEWNRIARTVYWDKIKGDEIPEGEDLTMFDFAFNSGPAVALKKRRGLKGTPDDIIKAIAERRLTFLHALRNWHYFGRGWTRRVTQCEALSLKMAGSVLGIRVEAKKALVESNKTATQAAVALGTAIPLAHLAPMVATIPAATGAFLVWKSHRHSQRSKTLMEA
Other Proteins in cluster: phalp2_21492
Total (incl. this protein): 134 Avg length: 257,4 Avg pI: 9,40
Protein ID Length (AA) pI
8pawf 216 9,42542
10mXd 264 9,78935
11AJL 258 9,65035
11ioC 253 10,18937
1afjr 252 9,73042
1bKQ6 252 9,73120
1bOJb 266 9,79779
1cnAj 252 9,68162
1cpkc 252 9,60310
1dHRm 266 9,05776
1dJJE 275 9,21171
1dVNi 252 8,76340
1eWin 278 8,88350
1fQIA 264 9,76685
1fSwp 265 9,51587
1fu1R 281 10,40354
1klBm 260 9,76098
1lygL 258 9,78051
1oBjk 258 9,56938
1pDHS 237 5,62879
1qZuM 257 9,64055
1r43p 252 9,77471
1rmzC 252 9,70676
1rpiL 264 9,77317
25oxV 240 9,78097
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_14059
8aO3S
 400 40,9% 171 2.461E-69
2 phalp2_18877
1MrjM
 564 37,5% 176 2.303E-62
3 phalp2_37851
4LyyS
 5845 38,2% 170 5.920E-62
4 phalp2_4978
6Oe3B
 241 34,7% 207 4.379E-59
5 phalp2_1403
1nDVZ
 22 37,2% 236 1.393E-57
6 phalp2_12946
360Ik
 1926 34,7% 167 9.189E-57
7 phalp2_34743
3e4sK
 352 37,0% 170 4.427E-56
8 phalp2_36337
jh4L
 2 32,2% 239 1.937E-51
9 phalp2_20698
4XKIk
 408 30,4% 164 2.156E-49
10 phalp2_23908
1Le4q
 257 32,5% 163 1.275E-44

Domains

Domains
GH108
Unannotated
Representative sequence (used for alignment): 8pawf (216 AA)
Member sequence: 1rt2U (264 AA)
1 216 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF05838

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (8pawf) rather than this protein.
PDB ID
8pawf
Method AlphaFoldv2
Resolution 78.75
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50