Protein

Protein accession
3dxLm [EnVhog]
Representative
3dxLm (this protein)
Source
EnVhog (cluster: phalp2_34258)
Protein name
3dxLm
Lysin probability
92%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MNWLCVTLMLCAFSPLDTMTYENNDEFIEQARTCAIWYNTEVPPQNRVPWQLAVAQAIQESNYGKSYFAIEANNIMGIKEFDDTRDGLKPRDNLNVKWSIKIFDTKCQSLIFYMILLNTNHNYEEFRLEQLKQWTADYADLEKLAKSIAIYAEDVYYTQKIIQILRELKNYE
Physico‐chemical
properties
protein length:172 AA
molecular weight:20381,0 Da
isoelectric point:4,82
hydropathy:-0,38
Other Proteins in cluster: phalp2_34258
Total (incl. this protein): 725 Avg length: 186,0 Avg pI: 7,59
Protein ID Length (AA) pI
109vk 173 5,33027
11QrA 173 5,62566
11TyZ 210 9,77877
12bNO 183 5,17078
12wkJ 182 5,44878
15ql0 211 9,78354
17stE 192 8,31064
19CoP 212 9,75930
19EVF 212 9,80843
19Ipf 204 9,90964
19OMw 201 10,03600
19tjJ 172 5,00811
19zBH 201 9,96470
19zp6 195 9,89346
1A7JS 218 9,44386
1AH7l 201 9,84698
1ApS6 218 9,44386
1DFEP 182 6,51724
1DJHQ 201 9,91010
1HRpG 204 9,04596
1HYu 206 8,84708
1Hix 168 8,38690
1JHkH 190 9,88437
1JNKl 213 9,65396
1K082 201 9,87245
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_27854
8z2UL
 887 36,2% 149 7.490E-68
2 phalp2_9899
2Cydi
 49 33,9% 168 5.285E-61
3 phalp2_17928
YxWk
 140 29,4% 153 1.052E-54
4 phalp2_2807
8wEtz
 388 29,8% 154 1.442E-54
5 phalp2_14296
3BOkB
 198 41,0% 129 1.109E-48
6 phalp2_11429
8zF3P
 9 26,1% 157 1.329E-37
7 phalp2_4384
2huub
 3 24,2% 161 1.862E-28
8 phalp2_374
7enmQ
 47 25,6% 152 2.018E-15
9 phalp2_5346
2cQBB
 648 26,5% 128 9.531E-15
10 phalp2_24548
7J4ML
 47 20,3% 162 2.116E-13

Domains

Domains
GLUCO
Protein sequence: 3dxLm
1 172
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01832

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3dxLm
Method AlphaFoldv2
Resolution 92.34
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50