Protein

Protein accession
1yDOx [EnVhog]
Representative
4pbkX
Source
EnVhog (cluster: phalp2_34915)
Protein name
1yDOx
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MYPIKAPIVTFPYGAKYKSGATHKGVDFRANKSSVYAAVNGVVVHAGRHVYKKGWGFAFGVHVIVDNDAFPDGTGGFYAGYCHLSAVSVKVGQRVAKGDLVGISGNTGFSTAPHLHFQILSSRTWNPNKAKNPQKWLDA
Physico‐chemical
properties
protein length:139 AA
molecular weight:14950,8 Da
isoelectric point:9,87
hydropathy:-0,16
Representative Protein Details
Accession
4pbkX
Protein name
4pbkX
Sequence length
141 AA
Molecular weight
15432,44970 Da
Isoelectric point
10,32482
Sequence
MAYPLKAWRTTFPYGVKYSNGGIHKGIDGAAKVGTPVYAAVSGRVVHSGVHKFRKGWGSAFGIHVIVDNDKFKDGDAGLWAGYCHLSKVALAVGQRVERGDLIGWSGNTGRSTGPHLHFQILASRTWNPRKHVNPQRWLKA
Other Proteins in cluster: phalp2_34915
Total (incl. this protein): 159 Avg length: 143,0 Avg pI: 10,02
Protein ID Length (AA) pI
4pbkX 141 10,32482
131OI 149 9,18612
1931i 141 10,17661
19ORZ 140 10,09821
19OyC 140 9,96831
1JRGF 143 9,54282
1JRRE 140 10,29007
1JXDi 140 10,00403
1JZBf 140 10,17152
1K2uM 141 10,05393
1K9sG 143 10,10602
1KaWn 139 10,05831
1Kef6 140 10,00454
1KgVd 141 10,21374
1Kil8 140 10,03845
1KkEi 152 9,96090
1Kmhs 140 10,10885
1Llja 140 10,11021
1dZzY 140 9,96019
1h61p 167 9,49911
1vFwN 140 10,21729
27Pm2 140 10,11021
2R8NC 140 10,41230
2kTs4 139 10,50727
30C9t 152 9,20675
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_32582
1JRhw
 2 62,7% 86 4.175E-43
2 phalp2_40658
5cY9d
 663 42,6% 143 1.476E-42
3 phalp2_32775
2hNmx
 15 39,4% 147 2.044E-32
4 phalp2_21998
4ZChj
 22 38,0% 142 3.493E-31
5 phalp2_25136
1CoHT
 3 38,8% 139 4.789E-31
6 phalp2_33390
6Q97d
 9 35,9% 142 2.888E-29
7 phalp2_28422
1FQvo
 13 42,1% 114 4.930E-28
8 phalp2_14848
7w0BH
 74 36,1% 144 1.269E-27
9 phalp2_26412
1I66q
 14 42,1% 102 1.740E-27
10 phalp2_18623
3ebV
 83 42,1% 140 2.384E-27

Domains

Domains
PET_M23
Representative sequence (used for alignment): 4pbkX (141 AA)
Member sequence: 1yDOx (139 AA)
1 141 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01551

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4pbkX) rather than this protein.
PDB ID
4pbkX
Method AlphaFoldv2
Resolution 91.90
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50