Protein

Protein accession
3s40 [EnVhog]
Representative
3s40 (this protein)
Source
EnVhog (cluster: phalp2_24864)
Protein name
3s40
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MAVKTVNNQTDRSRKLAKNFTASEFLCKCGKCSTSLIDDTLISRLQKLRDKLGTPIHINSGYRCPAHNKAVGGASNSNHTKGMAADIKSEGQPTEKIAKLAEEVGFKGIIRYTGNKNFVHVDTRTTKYFAVDTNGKIAVKSTFGAVSFSVPTDTLRKGSKGDGVKWLQQKLGLTMDGIFGSKTDMAVREFQKKNGLDVDGAVGPKTKSVLR
Physico‐chemical
properties
protein length:211 AA
molecular weight:22873,0 Da
isoelectric point:9,87
hydropathy:-0,48
Other Proteins in cluster: phalp2_24864
Total (incl. this protein): 583 Avg length: 216,2 Avg pI: 9,52
Protein ID Length (AA) pI
13Gsi 219 9,52902
13xLo 219 9,46907
13y5z 218 9,33987
1FDqa 218 9,36966
1koG1 217 9,59523
1m2wq 217 9,46662
1mVZH 216 9,18154
1mfRr 216 9,23885
1mhed 216 9,40215
1mjIK 219 9,56622
1mm2g 216 9,51007
1mmAh 218 9,49112
1n82b 219 9,52664
1n8Dt 218 9,35431
1neV1 217 9,62992
1njm7 217 9,59523
1o14m 222 9,31338
1o1au 220 9,56158
1o3iW 219 9,44734
1o7aE 212 9,51078
1ocj6 217 9,51013
1r5H0 217 9,56500
2l3TL 216 9,35451
2l3Ur 219 9,73294
2lQjz 219 9,66376
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_29110
706jf
 8 34,5% 136 6.666E-59
2 phalp2_40479
4y8zU
 266 44,5% 220 1.251E-58
3 phalp2_11660
1FFlu
 17 38,5% 244 2.689E-44
4 phalp2_25775
7DHy0
 3 41,4% 193 6.894E-44
5 phalp2_30939
1345B
 93 43,7% 153 4.037E-39
6 phalp2_28983
6dp36
 8 26,5% 241 1.034E-38
7 phalp2_3181
8qBIB
 378 44,2% 138 3.974E-36
8 phalp2_40197
2bNeh
 8 38,1% 194 4.212E-31
9 phalp2_17462
4UpQn
 1 43,4% 129 3.330E-29
10 phalp2_34760
3hjNi
 68 36,9% 138 5.729E-21

Domains

Domains
PET_M15
PG_1
Protein sequence: 3s40
1 211
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471, PF08291

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
3s40
Method AlphaFoldv2
Resolution 95.48
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50