Protein

Protein accession
2VdkV [EnVhog]
Representative
5WUZ5
Source
EnVhog (cluster: phalp2_19897)
Protein name
2VdkV
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAYTNSSLVSYTKLSPCNSGTRTHSIDRITPHCIVGQLSVESAGEWFSHESTQASCNYVIGADARVGLIVPESQRSWCSSSKWNDQRAVTVECASNKTHPDASNTYSKGDKVTYKGKTYESTIDNNSWSPEAYPQGWKEITE
Physico‐chemical
properties
protein length:142 AA
molecular weight:15692,0 Da
isoelectric point:6,07
hydropathy:-0,70
Representative Protein Details
Accession
5WUZ5
Protein name
5WUZ5
Sequence length
120 AA
Molecular weight
12932,25370 Da
Isoelectric point
7,67982
Sequence
MSNSALISYTKLSPNHSGKRTKKIDTITIHCMAGQLSVESCGALFAQSSRQASSNYGIGNDGRIALYVDEGNRSWCTSSNANDQRAVTIEVASDATHPYAVNSKAYDALLDLVTDICKRN
Other Proteins in cluster: phalp2_19897
Total (incl. this protein): 55 Avg length: 105,9 Avg pI: 7,79
Protein ID Length (AA) pI
5WUZ5 120 7,67982
13cEd 98 9,47229
19kc 139 8,96808
1JfOd 97 4,74938
1NeUH 72 5,42496
21tFZ 85 6,03013
23GXy 119 7,58462
2bqeW 95 6,38691
3GOyp 68 8,47774
3Zttn 117 7,70853
3llJA 119 8,58450
3sGw5 70 7,84627
3tjo7 55 9,41672
3u36s 70 5,79180
3vFMa 75 8,95777
3vsiY 135 9,21081
3wez7 94 8,48315
3wqJv 63 7,86632
3ywcE 64 9,50988
3yxzX 85 8,55439
41npQ 229 9,36224
4Larp 77 8,97833
4y6Cx 126 8,65045
4ydm3 137 8,47503
5MvvN 103 8,39857
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_26785
3pb5n
 118 71,4% 119 5.010E-66
2 phalp2_27777
7pibA
 19 67,5% 120 2.781E-63
3 phalp2_17569
6cDEC
 34 57,1% 126 2.647E-52
4 phalp2_14312
3Q436
 4 57,4% 94 6.529E-41
5 phalp2_2782
80Xv
 5 63,2% 79 1.407E-38
6 phalp2_539
wKIS
 2 52,0% 98 1.686E-33
7 phalp2_27000
8m8EW
 1 37,3% 126 5.704E-29
8 phalp2_23962
24EIj
 1 52,3% 84 3.017E-22
9 phalp2_30952
173qx
 118 33,3% 123 5.177E-21
10 phalp2_19958
6IXA7
 22 28,4% 95 2.210E-12

Domains

Domains
Ami2
Representative sequence (used for alignment): 5WUZ5 (120 AA)
Member sequence: 2VdkV (142 AA)
1 120 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2VdkV
Method AlphaFoldv2
Resolution 93.54
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (5WUZ5) rather than this protein.
PDB ID
5WUZ5
Method AlphaFoldv2
Resolution 97.87
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50