Protein

Protein accession
2bAVr [EnVhog]
Representative
3A548
Source
EnVhog (cluster: phalp2_19529)
Protein name
2bAVr
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAYSSMVTVKIMSPNMNKRRTYKVTRITPHCMVGQLSAKRCGELFSKESRGASSNYGIGTGGEVGLYVDEADRSWCTSSADNDNRAVTIECASNTSSPYAMNEKVWDTLIALCVDICRRYGKNTLIWFGDKKTSINYKPRENEMILTAHRWFAAKSCPGDWLYNRLGKLAEKVNAKLSVPSSASVQRVEETPNTEAAKLITNEESEREKKVWDFLTGKGLSAFAAAGIMGNLYAESAMRPNNLQNVYEKKLGYSDKGYTNAVNNGSYKNFVRDGAGYGLAQWTFHTRKQGLLDFAKKRGASIDDMDMQLEFLWKELSGGYSFVMDSLKTANTVRKASDAILIGYEKPANQGTQVQESRAKKGQEYYDRYAKKTQESSQAPKKTVYCVQFGAFATKANAEKKVQKARDKGLSPDVVKEDGLYKVRFGEFKTVSDANTAASSARKAGFKVIIKEMEA
Physico‐chemical
properties
protein length:455 AA
molecular weight:50635,8 Da
isoelectric point:9,36
hydropathy:-0,59
Representative Protein Details
Accession
3A548
Protein name
3A548
Sequence length
503 AA
Molecular weight
55538,01620 Da
Isoelectric point
8,83251
Sequence
MAYTNSPLVAYTKLSPNHSGQRTHAIDRITPHCVVGQCSVETLGNIFYPTSRQASCQYGIGVDGRVGMYVEEKNRSWCSSSNANDQRAITIECASDTTHPYAFKDVVYEKLIELCVDICKRNGKSKLLWLGDKTKTLNYSPKSDEMVLTVHRWFANKSCPGDWLYNRLGDLAKQVTDKLGGTTVTPATPETSTDGNDKVIWDYLKGKGLNDYAVAGIMGNLYAESGFKPTNLQITYEKKLGYTDATYTAAVDNGTYTNFVKDSAGYGLVQWTYWSRKQALLAHAQSVGKSIGDFTMQLDFMWEEMQGYKSMMTTLAGATSILEASNAVLTQYERPADQGETVQKKRAGYGQTYYDKYAQKATATDGLYRVQVGAFSKLDNANRQLAAVQAKGFDALIKKVGNLYKVQIGAYSVKSNAEAQLTRVKAAGFTDAYITTESGGTVVATTPQEEKPAYITYTVKKGDTLWDIAKKYLGSGSRWKEIYNLSGLTSQTIYAGQKLKIPD
Other Proteins in cluster: phalp2_19529
Total (incl. this protein): 66 Avg length: 454,7 Avg pI: 8,69
Protein ID Length (AA) pI
3A548 503 8,83251
13GRp 502 8,96228
13rHn 507 8,98620
15WRw 547 9,36108
19fQ4 455 9,12777
1kAW7 455 8,00673
1kvbZ 446 8,85456
21nG8 454 9,15227
21pu2 456 8,67237
21x8J 430 9,02482
237n6 511 8,95738
23EAh 400 7,25546
23EOu 430 8,50946
23HNT 449 9,12990
23J26 430 8,84553
23Ka0 430 8,87216
23t0j 472 8,69738
23uPs 443 9,06975
24LQ5 502 8,66289
2TtaO 437 6,63842
2XK5Z 502 8,99329
2bpiq 499 8,64349
2pUK3 428 8,93656
3TKFt 456 8,84540
3TKah 440 9,25961
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_20479
3TRRD
 962 67,1% 377 1.890E-187
2 phalp2_17251
3TIE6
 53 52,0% 405 3.491E-160
3 phalp2_18866
1JeL2
 29 47,4% 527 8.876E-157
4 phalp2_27209
3o7E3
 7 39,6% 452 1.760E-94
5 phalp2_31507
3VJ9A
 7 40,4% 363 3.076E-84
6 phalp2_10739
3iXeP
 1 23,8% 645 7.523E-77
7 phalp2_8982
3PMSU
 4 42,4% 311 4.909E-74
8 phalp2_4221
3vCra
 4 38,1% 333 9.256E-72
9 phalp2_23416
6fsej
 1 28,7% 389 9.806E-50

Domains

Domains
Ami2
Phage_lys2
SPOR
LysM
Representative sequence (used for alignment): 3A548 (503 AA)
Member sequence: 2bAVr (455 AA)
1 503 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01476, PF01510, PF05036, PF18013

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2bAVr
Method AlphaFoldv2
Resolution 89.76
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3A548) rather than this protein.
PDB ID
3A548
Method AlphaFoldv2
Resolution 89.38
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50