Protein

Protein accession
5W6VD [EnVhog]
Representative
5W6VD (this protein)
Source
EnVhog (cluster: phalp2_35173)
Protein name
5W6VD
Lysin probability
99%
PhaLP type
endolysin
Probability: 96% (predicted by ML model)
Protein sequence
MGFDSTARACLIATIARVEASGDYGCITAPDTLSLGIGQWTQGRAYDLLKRFSAGTDFGGTVNAWLTEGRDSWTISARKYQYLDSDDRAKLSGALDSAEGHQIQDSQMSMDIDDSYIPRVRELGLDPESETDAFMLFVIVMHRWGNYGSILPDIVADAGHPATLDSMAQAIKWNGEWDAVGQRYEIAYQMIRDRVTDGVQVPSSPGNTGNKDNGGGIKGNKTLASLAKQSRLINYVRENGDGTLHIQTSQGPVTAHPTSTGYWTCSPSGQRAQANKNMGGLGKKPGTEPPTGDTATKLAAMTKCAWDSIGKYVYYQHYLERLDPENSGETDCSGFCWYLYNKFFGIDIDRNGTAAIIESPTGTVVAEGDGSFDRPDLVREGDLLVCRWWSGGGHIEYCTGGDGGWQSIGQRGPDGVLGPDVGSLSMFKNCTWKLKRYV
Physico‐chemical
properties
protein length:438 AA
molecular weight:47607,4 Da
isoelectric point:5,05
hydropathy:-0,46
Other Proteins in cluster: phalp2_35173
Total (incl. this protein): 92 Avg length: 421,2 Avg pI: 6,48
Protein ID Length (AA) pI
11sSX 448 5,43946
11u0m 424 8,93063
11u3i 436 5,04653
1cskD 423 4,93791
1gEDS 443 5,65641
1kJua 424 8,93069
1kq7M 423 4,97838
1kq7R 445 8,60867
2biU9 427 4,74170
2biVC 277 5,11542
2bjBw 425 5,17686
3c55C 424 5,13150
3c5R9 426 4,98139
3c9eD 448 5,99557
3cfck 307 4,99543
5LRdW 439 4,91665
5LiDj 423 8,94997
5ME4Q 435 4,93035
5N5YJ 424 9,04770
5NyZP 435 4,87363
5Qbqh 424 9,01289
5RXRm 424 9,01289
5SFoX 301 5,21977
5ShfB 423 9,06788
5SlU8 450 5,12434
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_13422
4z3Nv
 671 24,8% 442 1.514E-35
2 phalp2_8162
6VfMu
 4 25,5% 438 1.250E-30
3 phalp2_9264
70WV0
 16 28,0% 282 2.261E-30
4 phalp2_11848
8fAiU
 1 23,3% 412 7.058E-10
5 phalp2_6579
1d7v3
 1 20,0% 430 1.543E-08
6 phalp2_23511
6YME8
 20 17,9% 318 6.258E-08
7 phalp2_32444
11uoj
 18 21,4% 331 1.917E-07

Domains

Domains
Unannotated
Unannotated
Unannotated
Protein sequence: 5W6VD
1 438
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
5W6VD
Method AlphaFoldv2
Resolution 80.54
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50