Protein

Protein accession
3e3cd [EnVhog]
Representative
4yvE1
Source
EnVhog (cluster: phalp2_19667)
Protein name
3e3cd
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MDLDDEELAYTLNKIERRLKMEKSEFIPRIAPIVQAENKKRGNPLFSSVVIAQAICESGWGQSQIMMKANAIFGIKATSSWKGKVYNAKTKECYDGINYTTITDCFRAYDSLEDSIADYFHLICGLSRYSKALYTSSPLECITEIKNGGYATSPTYVNTIMSIIKQNNLVRFDSTNSCLYEIGKNYTLQVNLNVRTGAGTNYRIKKFTELTPDGKKHAFMQENAVLKQGTIVTCQDILINDSDIWLKIPSGYVAGYYKGKEYIK
Physico‐chemical
properties
protein length:264 AA
molecular weight:29821,8 Da
isoelectric point:8,66
hydropathy:-0,33
Representative Protein Details
Accession
4yvE1
Protein name
4yvE1
Sequence length
239 AA
Molecular weight
25545,04610 Da
Isoelectric point
4,98082
Sequence
MATKDQVNNFITQLAALACAEYAKREKWVLPSVCIAQAALETGWGTSGLMTKANAYFGIKAGTSWKGKVYSSKTSECYDGVNYTTITDTFRAYDNVEASVADYYDLICGATRYAGAVNNADAESAITAIKNGGYATSPTYVKNVMSIINTYNLTQYDTRDGSNQAAASGTSNQAAESTGEYKVGDVVRVINPVTYNGVKFAVYYSEYDVIQVNGDRVVIGIGTTVTAAVNAANIAKDNE
Other Proteins in cluster: phalp2_19667
Total (incl. this protein): 134 Avg length: 256,6 Avg pI: 7,65
Protein ID Length (AA) pI
4yvE1 239 4,98082
13Beo 253 9,32350
13z77 172 7,61991
1J6LP 223 9,83093
1cTBx 261 9,17026
1f9fy 222 9,67034
1gHl6 239 9,48886
1gIRw 239 9,32156
21GdN 248 9,48235
21fiC 244 8,90387
21q4v 245 8,76907
21wiI 253 9,36985
2VbuC 258 8,87564
2VjIT 248 5,39831
2fWVh 248 9,41756
38HCY 258 8,94236
38NU6 252 9,08858
3KQdh 305 6,74005
3LSNh 264 5,62492
3PAD9 301 9,44006
3TScg 196 9,22815
3bYEz 250 8,58366
3nIHW 298 9,47403
3pgOW 147 9,39067
3qEpN 296 9,12152
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_28304
13qfb
 5 51,5% 196 2.810E-70
2 phalp2_21235
1gIfg
 3 50,8% 177 2.874E-61
3 phalp2_2026
2muJS
 52 46,6% 150 8.891E-48
4 phalp2_17322
4k4va
 55 36,9% 249 3.813E-46
5 phalp2_2210
4f9X6
 94 49,6% 149 9.756E-46
6 phalp2_3102
419EZ
 42 44,3% 151 2.437E-42
7 phalp2_19230
41fA9
 30 40,7% 179 2.361E-39
8 phalp2_36044
5XzlK
 69 43,4% 161 4.409E-39
9 phalp2_33491
7wA0y
 13 36,8% 190 4.409E-39
10 phalp2_29953
8uJbN
 74 37,5% 192 2.101E-38

Domains

Domains
GLUCO
Unannotated
Representative sequence (used for alignment): 4yvE1 (239 AA)
Member sequence: 3e3cd (264 AA)
1 239 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01832

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4yvE1) rather than this protein.
PDB ID
4yvE1
Method AlphaFoldv2
Resolution 86.57
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50