Protein

Protein accession
3h5um [EnVhog]
Representative
1rkWk
Source
EnVhog (cluster: phalp2_29740)
Protein name
3h5um
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MKVVDISHYNGTVNFNRLKAAAEGVIVRLGYRGYSKGALVTDGNYLDNMKKATAAGFKVGVYFVTQAISEEEAREEARYTLERAKEFYPYFPIFIDTENGNAAKTGRADEGKLTAAKRTAIIKAFCEEIEKGGYKAGIYASESWFKDNLQLNPLSKYYLWVAKYSKNKPAIKYNAWQYTAQGRVEGITGYCDVSDFIIPKLTNNQVVDEVIAGLWGNGAERKIRLAAAGYNANEIQSIVNKKLGTTSKPMYYLIKKGDTLSSIAKMFSTTVKQLQEWNNIKDVNKIKAGVKIRVR
Physico‐chemical
properties
protein length:295 AA
molecular weight:33020,4 Da
isoelectric point:9,51
hydropathy:-0,39
Representative Protein Details
Accession
1rkWk
Protein name
1rkWk
Sequence length
277 AA
Molecular weight
30692,80970 Da
Isoelectric point
8,86261
Sequence
LKKVIDLSKHNVITSWAGVKAACDMVVLRIGYRGYTNGKIAMDQKFKENLAAAQKIGIPVGFYFFPCSITDQEAIEEADFCAEAVKGLPIVLPLFADSEVSDAVHHAGRSDHLSVQQRTHLLKVFCDRLQSKGIPAGIYASTSWLNTKLDMSQLPYTVWVAQYAPTCKYTGKYLLWQFTSRANVAGVLKPCDMSYVIDAAEKNPYREPVTTVRKGDSGAIVKWVQWYVRAKEDGVFGGNTESAVIAYQKKAFPDDKSEWDGEVGPHTKAAFKKNGRA
Other Proteins in cluster: phalp2_29740
Total (incl. this protein): 100 Avg length: 310,9 Avg pI: 8,20
Protein ID Length (AA) pI
1rkWk 277 8,86261
1GNHN 308 8,08886
1GTmM 306 9,57325
1gAuw 293 9,12964
1jHkB 315 8,64864
1qxoK 309 5,67483
21sIY 307 9,44631
23BOu 279 5,08802
23CKt 280 5,32862
24kMV 350 6,82224
3AsAc 381 5,39654
3VEIT 304 9,56042
3VF3S 306 9,35464
3WDH4 303 9,34954
3WIrm 305 9,40112
3WNdx 312 9,11198
3ZUL0 310 7,54114
3dYdh 210 7,61344
3fSyQ 279 5,15521
3fTEY 262 5,66590
3h4W6 279 5,02260
3iBfO 312 9,20758
3ivCl 343 9,57125
3l58M 371 8,41656
3mraG 355 6,76437
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_6199
5X5xO
 102 42,7% 199 1.644E-77
2 phalp2_5668
4yhqW
 7 44,2% 183 3.799E-73
3 phalp2_2537
6a7No
 192 30,0% 286 4.661E-69
4 phalp2_26548
858CP
 728 33,3% 219 2.751E-67
5 phalp2_3425
3TK4D
 923 39,3% 201 6.331E-66
6 phalp2_10110
c1k0
 16 32,6% 236 4.508E-60
7 phalp2_33310
6kV0o
 68 32,5% 209 7.550E-59
8 phalp2_19565
3TIJJ
 398 30,7% 244 1.931E-58
9 phalp2_14288
3xQM7
 130 27,3% 307 1.931E-58
10 phalp2_24035
8aWkT
 56 29,3% 215 3.612E-58

Domains

Domains
GH25
Unannotated
Representative sequence (used for alignment): 1rkWk (277 AA)
Member sequence: 3h5um (295 AA)
1 277 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (1rkWk) rather than this protein.
PDB ID
1rkWk
Method AlphaFoldv2
Resolution 95.32
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50