Protein

Protein accession
3mqd7 [EnVhog]
Representative
6gC98
Source
EnVhog (cluster: phalp2_16417)
Protein name
3mqd7
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MEIKGIDVSSWQGKPDWAKVSKSGVKFAILRIHQKSGIDESFEHNYKGCKSNGILIGGYKYSYALTPAQAIDEAENLISVLGGRGLDFPVFYDLEWSQQRSLGKQAIENIAVAFLTRIKKSGYKVGIYCNLDWYNNVLSDVLKQYDCWITRYPANDNGSVQERLRPTVGVGWQYSSKGKVPGINGNVDMDVFYKDYRDSNQKGETKMVKISNCGHDERGRYAGGKAGDQTGTEYQIMNWYSRPWLCVLRFNDAKIATMIADMATKAAQNNLIGYDQGTSGNSNDRYSFWRHLKASNYDPAQITVACESDCSASTAAIVKGAGYRLNNAKLKAVSIYLTTRNMRAAMKAAGAKVLTDSKYLTSGDYLKAGDILLNDNHHVAIAVTTGAKASTPSTTLTGTFQTRLPILRKGSSGTAVAMLQAMLGVEVDGQFGNDTYNSLKVFQKNVGVKANGTCGIDTWKRVIEHMKANTK
Physico‐chemical
properties
protein length:471 AA
molecular weight:51835,2 Da
isoelectric point:9,26
hydropathy:-0,41
Representative Protein Details
Accession
6gC98
Protein name
6gC98
Sequence length
563 AA
Molecular weight
62884,49500 Da
Isoelectric point
9,43142
Sequence
MTYIGICAGARPEKGRQMEIKGIDVSSWQGKPDWAKVSKSGVKFAILRIHQKSGIDESFEHNYKGCKSNGILIGGYKYSYALTPAQAIDEAEDVLSVLCGRGLDFPVFYDLEWKQQRSLGKQAIENIAVAFLTRIKKAGYKAGIYCNLDWHNNVLSDALKQYDCWIARYPANDNGSAQERLRPNVGVGWQYSSKGKVPGINGNIDMDVFYTDYRTEQKGEVTVTKTKLQKFTELGDYYANNGGNKPYLEKRTNAYLDDFQKNAGYNNYTKFARDVDNWGQPGCQGQPWCAEFQFWKLVKILGITKALQIMGGGFYNCRSITQWAKKNGTWHSTPKDGALVIFRDGSHIGSVRTFSKTYVYTNEGNTSSATGVIANGGSCRNKQYLLSNPVIDGYVWIDWDRKTQSTDTWKATGTATSTVDDLYIRETPNGYVLGQINKGNRVEINGEKSGMWTKVKVVGIGIGWAATKYLQVDGAENKPTTITNKQNKTQRLFVGKVSAASTVVRTWAGGNYPSIKKWPKLVRGNLVDVMNFTQKATNGVSWHYVRIAGKYYGFVAAKDICKV
Other Proteins in cluster: phalp2_16417
Total (incl. this protein): 231 Avg length: 493,7 Avg pI: 9,28
Protein ID Length (AA) pI
6gC98 563 9,43142
21EfG 495 9,45675
24nKV 495 9,52412
2lRKG 471 9,28069
3B3kZ 548 9,36663
3KMbR 548 9,26625
3kkMh 471 9,30687
3l36n 471 9,33259
3lJZf 485 9,33040
3lUZz 473 9,37198
3lVw7 471 9,16297
3m4SB 495 8,83244
3m9zc 495 8,89111
3mdnp 473 9,29977
3mlJk 473 9,39938
3morU 471 9,20829
3mxHD 473 9,40602
3myfu 473 9,37198
3qZlU 473 9,33123
3qgEJ 471 9,30699
3rPE8 586 9,23950
3sOd5 471 9,25226
3sOqe 473 9,39957
3sTCE 473 9,39925
3stTl 471 9,20281
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_30592
67VKs
 21 74,2% 342 1.120E-191
2 phalp2_34762
3ij83
 364 38,4% 591 1.831E-144
3 phalp2_15741
3tdUS
 229 41,1% 484 3.312E-125
4 phalp2_38736
13rhz
 58 36,8% 437 3.714E-79
5 phalp2_2377
7JCYq
 91 30,2% 581 5.871E-74
6 phalp2_1134
5riG
 24 26,9% 608 9.527E-64
7 phalp2_4916
6k3vw
 208 33,1% 431 1.084E-57
8 phalp2_34377
4dm6y
 15 34,8% 405 2.684E-57
9 phalp2_38640
41jQJ
 13 32,9% 391 4.910E-57
10 phalp2_4009
11iJK
 7 28,7% 425 1.261E-42

Domains

Domains
GH25
Unannotated
SH3_3
Unannotated
Representative sequence (used for alignment): 6gC98 (563 AA)
Member sequence: 3mqd7 (471 AA)
1 563 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183, PF08239

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (6gC98) rather than this protein.
PDB ID
6gC98
Method AlphaFoldv2
Resolution 87.17
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50