Protein

Protein accession
3yVw4 [EnVhog]
Representative
2nYlj
Source
EnVhog (cluster: phalp2_39111)
Protein name
3yVw4
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MRQLQCLLYKNPCYQSGKTITPTKIVVHSTGANNPWLLRYVQPHSEQTTGMEEYQPVRKTYTRAEMLAVLGQNRYGNSWNRENMSACVNAFVGKLDDGSIAVVQTLPWTMRPWGVGSGKNGSYNDCAIQFEICEDDHSSAAYCQETFDVAAELCAHLMRTYPTITEIVSHHEAYQRGYGSGHNDPDNWWPMHGLDMDLFRAKVQALLAAGTLPPEQPQPPEDDAGQMYRVRKSWADKASQTGAYKSLDNAKNACGAGYTVYDQDGNAVYSRPEIQVDPAMSLDDRLAGSYTVKANGGLHLRAGAGTDKASLEVMPDGSSVRCYGFYTGDWLLVVADSGKTGFAHRGYLVR
Physico‐chemical
properties
protein length:350 AA
molecular weight:38690,9 Da
isoelectric point:5,93
hydropathy:-0,51
Representative Protein Details
Accession
2nYlj
Protein name
2nYlj
Sequence length
331 AA
Molecular weight
37124,33310 Da
Isoelectric point
6,45460
Sequence
MRLFESILTLNDCYKAGRTITPKGIMVHSTGANNPWLKRYVPDDGRLGYNQYNNHWNMSGVGACVHGFIGKMADGTVATYQTLPWNWRGWHAASGNKGSANNTHISFEICEDGLTDATYFRAVFNEAAELCAYLCKMYNLNPLTDIICHSEGHTMGIASNHGDVMHWFPKHGENMDTFRQKVYELVNEEFKWNESKVDYIGTVSVKGDVLNIRKQPRVGASIIGKHADGDTVTICAQTDNGWYRVEYPTIGTGYISSAYVSVSDRKAPQSEVKPEVIKDNTPDAWAAEAVNNAVKNGILYGDDTGNYKLHSECTRQEMLIFLYRFYKSIKG
Other Proteins in cluster: phalp2_39111
Total (incl. this protein): 83 Avg length: 339,9 Avg pI: 8,23
Protein ID Length (AA) pI
2nYlj 331 6,45460
1FCY1 317 9,67724
1Jeno 356 9,24697
1jHM1 351 8,72459
1kcEy 351 8,61828
1kryb 351 8,72001
1njCb 351 8,62228
2lDAQ 335 5,89315
3etpH 288 9,23518
3rQA6 351 8,79969
3uIba 351 8,88608
3un4d 304 5,29708
3vG2A 351 8,89743
3vRgv 351 9,01772
3ygvB 351 8,71956
3ykcd 293 5,11582
5JVHV 351 8,97305
5KvO7 304 5,14281
5L6k9 351 8,80994
5Lc0R 352 8,89169
5LcCu 310 9,00096
5OeTY 351 9,01772
5PKz7 398 9,10257
5PpAb 351 8,80472
5QcjF 351 9,05054
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_17183
3bJIf
 458 61,8% 233 8.862E-99
2 phalp2_36261
3rB1
 176 39,4% 368 1.213E-98
3 phalp2_10292
1gBJ2
 1 38,1% 296 4.259E-72
4 phalp2_32070
5P7Lm
 156 40,0% 252 5.198E-71
5 phalp2_25741
4Lci3
 6 41,6% 228 7.463E-66
6 phalp2_8994
3TJvI
 23 35,9% 292 3.665E-60
7 phalp2_17257
3WAN9
 1 37,2% 271 2.876E-58
8 phalp2_37002
o6En
 47 29,8% 355 5.722E-56
9 phalp2_24341
3TP9g
 1 26,6% 368 5.619E-44
10 phalp2_12285
7dvAF
 4 29,2% 263 1.681E-42

Domains

Domains
Ami2
SH3_3
Unannotated
Representative sequence (used for alignment): 2nYlj (331 AA)
Member sequence: 3yVw4 (350 AA)
1 331 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510, PF08239

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (2nYlj) rather than this protein.
PDB ID
2nYlj
Method AlphaFoldv2
Resolution 88.85
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50