Protein

Protein accession
8dgkX [EnVhog]
Representative
8dgkX (this protein)
Source
EnVhog (cluster: phalp2_29898)
Protein name
8dgkX
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MDSHLLRNIKGCEQYGVPMGIYVYCYDQSADAAAITAQQVIKAISGHKFDYPIYYDVEYEPFNKTCGKAVNTAIIKSALEVWEKAGYYAAVYCSRDFFVNYTNLSALNGFDKWEAAYTATDTDAVKNGLWQYSSRNALGIKGFGASLDCDVSYVDYPAIMRAKGLNGYPKPSTDTKPAENTTPLQCPTIGPMSKGDFDAILAAANGSTXXXGLHRHIPAHDHRCGQRLAAESTRPVCWLFQHVGGGLTDGTDYCTDAARSAVVACDGLRGRSGRLSGRP
Physico‐chemical
properties
protein length:279 AA
molecular weight: Da
isoelectric point:6,64
hydropathy:
Other Proteins in cluster: phalp2_29898
Total (incl. this protein): 166 Avg length: 287,7 Avg pI: 7,23
Protein ID Length (AA) pI
13xM3 283 6,73635
13ykH 283 8,07088
2lZ99 315 6,35093
2lZM4 313 6,19962
2mCnF 309 6,44176
2mcmz 300 6,44409
3KQvg 297 6,36946
3k4dO 298 6,20474
3l5D9 349 7,58831
3l8kA 269 8,14508
3lTXP 265 7,54301
3lZM5 278 8,09821
3mgen 278 8,05811
3oXAb 309 6,89374
3orKY 298 6,29670
3p3Mj 278 7,55404
3p9Xl 309 6,95422
3pSOV 265 8,33410
3q4DA 309 8,18428
3q7Ei 311 7,60576
3qiUG 265 7,54097
3qjMS 269 8,16391
3r2db 269 8,15307
3r33y 278 8,04986
3r3Yr 297 6,36946
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_3425
3TK4D
 923 39,7% 171 5.514E-64
2 phalp2_6199
5X5xO
 102 32,8% 207 5.955E-59
3 phalp2_24363
400dW
 200 31,8% 179 3.635E-44
4 phalp2_31512
3WNwM
 280 35,0% 180 3.635E-44
5 phalp2_5154
21CAt
 14 25,4% 216 1.975E-26
6 phalp2_38437
1cCmC
 101 26,5% 200 2.683E-26
7 phalp2_20198
86Qny
 1 25,6% 191 1.783E-20
8 phalp2_26836
3VG5h
 3 21,9% 237 3.443E-13
9 phalp2_32227
7cHL2
 31 20,4% 205 2.719E-12

Domains

Domains
GH25
Disordered region
Protein sequence: 8dgkX
1 279
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
8dgkX
Method AlphaFoldv2
Resolution 72.54
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50