Protein

Protein accession
yopH [EnVhog]
Representative
yopH (this protein)
Source
EnVhog (cluster: phalp2_2897)
Protein name
yopH
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MNAGQLDSIDFVVIHNDAGSMTPEQYVEWLRYRDKALGIAHYYCNKDTIARVIDTYNIGYHTGEWWSNTHSIGYEVCESMKVSDEDFLANEDMALMQATEDLIYYGLPINKQTVRLHHEFSPTSCPHRSLALHGGTTDSVKTYFVERMNYFATLGETVDEMLGNTSISEPSTSTNSVSTGDKSNEEIAREVISGAWGNGEDRVNRLTNAGYNASAVQEVVNRLLNGNYTSNNLDEIAQEVIQGKWGNGQDRVNRLTNAGYNYSEIQQKVNEILG
Physico‐chemical
properties
protein length:274 AA
molecular weight:30703,4 Da
isoelectric point:4,73
hydropathy:-0,56
Other Proteins in cluster: phalp2_2897
Total (incl. this protein): 100 Avg length: 296,4 Avg pI: 5,08
Protein ID Length (AA) pI
1HKi8 344 4,38225
1cwVK 344 4,59153
1cxtI 241 5,80942
1iXv2 307 6,71521
1j358 301 7,13599
1jLKl 283 4,79513
1kIN4 246 5,82227
1kJ8K 344 4,51383
3cdGM 236 6,89817
4SXSg 316 5,37978
5O87U 347 4,44745
5OVFV 283 4,70231
5X9SH 283 4,66969
5Y7QW 287 4,51111
65Bco 343 4,58443
65W4I 327 5,98761
69OY8 241 5,62538
69Y7w 197 7,09921
6Ybg3 283 4,85555
6ZHu9 348 4,51639
6ZWv6 245 4,67668
6Zald 344 4,51878
6Zdp5 283 4,75642
6ZqLE 241 6,04235
6ZydG 283 4,70231
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_1607
7ZyR0
 345 34,9% 283 2.174E-49
2 phalp2_11417
eYHn
 21 33,0% 278 1.757E-42
3 phalp2_27991
13d0S
 3 35,6% 261 1.757E-42
4 phalp2_36896
7vCZc
 30 34,9% 203 3.236E-37
5 phalp2_14834
7s5S0
 47 31,3% 246 1.437E-31
6 phalp2_7784
7lEhL
 1 30,1% 196 2.011E-25
7 phalp2_20487
3X7ua
 81 28,0% 267 6.844E-25
8 phalp2_10280
1cMFf
 75 27,7% 285 3.070E-22
9 phalp2_6225
6oM64
 106 30,1% 202 6.424E-21
10 phalp2_14279
3nRBR
 57 33,4% 239 8.703E-21

Domains

Domains
Ami2
CW_7
CW_7
Protein sequence: yopH
1 274
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510, PF08230

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
yopH
Method AlphaFoldv2
Resolution 82.53
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50