Protein

Protein accession
117ak [EnVhog]
Representative
3TRRD
Source
EnVhog (cluster: phalp2_20479)
Protein name
117ak
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VWHVTASKGTPESTAAFLARATTQASYNYLVGLGRIILVVYEWFRSWATSSRDVDMNAITIGIRNSAASHPWPISDQDYETAINLTVDICRRNNIRRLTWAGDNRNFRLQFDRSNMQAHRWFANKACPGQFLIDRMQRICDEVNAQLNVPATPPAGSFEVRINTQSSPLNVRAGAGTNQAFLDTVPRGSIQTIVEERNGWGRLQQLVQGRAGWISMDFTERITPPPQVPPPPQRPTDANARAFVTPLYRGLLDRAPDANGLTHWSNMIVNGATATTVANGFLNSTEFRNRVDRLGIPR
Physico‐chemical
properties
protein length:298 AA
molecular weight:33302,1 Da
isoelectric point:10,09
hydropathy:-0,40
Representative Protein Details
Accession
3TRRD
Protein name
3TRRD
Sequence length
428 AA
Molecular weight
48135,08010 Da
Isoelectric point
8,69113
Sequence
MNNSSLVVHTNLSPNCTKPRDHVIDTITIHCTAGQCTVESLGKIFEKSERKASSNYGIDKDGRVGLYVEECNRSWCSSNRANDMRAITIEVSSDSTDPYKVTDKALDTLVVLCADICKRNGIKKLVWSVNKNDRINHLNGCNMTVHRDFANKACCGEYLYGKHGWIAAQVNKLLSTGETEMAIKKKKVNMSVNEIYKYFIGKSLTNAGVAGLLGNLNAESGLRANNIQNSYEKKIGMNDEQYCDAVNSGAYSKEKFVNDKIGMGLAQWTFYTRKQKLYEYAESIGHYIDSTEMQVQFLYKELCENYGSVLKVLKTSNDVKECSDCVLTQFEKPENQSDAVKQTRYNMSLSIYTKYKTDNNNVSTNKEVPFLVKVNIDNLNIREGAGTKYNKKGKIPKGTYTIVEVQNNNWGKLKSGLGWICLDYTETV
Other Proteins in cluster: phalp2_20479
Total (incl. this protein): 962 Avg length: 419,6 Avg pI: 9,08
Protein ID Length (AA) pI
3TRRD 428 8,69113
13AgN 515 9,03229
13B21 515 8,92257
13Cmv 470 8,70570
13clv 489 8,92437
13qOT 500 8,85610
13qyq 469 8,94874
13rgn 375 8,50256
13vYo 432 8,52686
14yJ 335 9,20165
14yU 469 9,00786
19lfx 320 9,19308
1FVbN 335 9,06143
1Hqfl 603 6,65320
1Ny1N 291 9,08916
1NzXA 511 8,11285
1NzZT 488 6,57396
1cMB3 426 9,36734
1ctny 528 8,88840
1k6K6 334 9,52541
1k9hD 469 9,06240
1kcyG 458 9,05815
1kdP7 334 9,47526
1m6uH 469 9,06240
1mdnq 469 9,06240
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_19529
3A548
 66 49,2% 376 3.309E-181
2 phalp2_18866
1JeL2
 29 35,7% 610 3.743E-176
3 phalp2_17251
3TIE6
 53 46,1% 427 1.201E-171
4 phalp2_5251
813lL
 211 27,4% 615 3.089E-120
5 phalp2_1650
8m87G
 265 36,6% 436 2.108E-108
6 phalp2_25651
4k5ro
 34 35,0% 334 2.304E-106
7 phalp2_20828
6lIKR
 83 34,2% 461 3.438E-104
8 phalp2_12977
3h4lU
 700 33,1% 435 6.822E-91
9 phalp2_21764
3VDPY
 2 39,5% 293 1.217E-87
10 phalp2_31507
3VJ9A
 7 30,1% 392 8.203E-70

Domains

Domains
Ami2
Phage_lys2
Unannotated
Representative sequence (used for alignment): 3TRRD (428 AA)
Member sequence: 117ak (298 AA)
1 428 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510, PF18013

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
117ak
Method AlphaFoldv2
Resolution 89.59
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3TRRD) rather than this protein.
PDB ID
3TRRD
Method AlphaFoldv2
Resolution 91.66
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50