Protein

Protein accession
13rdU [EnVhog]
Representative
4kbYu
Source
EnVhog (cluster: phalp2_3502)
Protein name
13rdU
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAGRKITVKGLMLHSVGCPQPRASVFINSWNSPSYSNACVHGFIDGNDGTVYQTLPWNHRGWHCGSGSKGSGNNTHIGVEMCEPACIKYTGGSSFTCSDKATAKAVAKRTYEAAVELFAMLCKQYNLNPTADGVIISHREGHSRGIASNHGDPEHLWNGLGMGYTMDGFRKAVKAAIDGSGSSGGGTGTSGLQASALKNLSEADVIAKVGPLFTADQKTSGILASVSLAQFILESGYGKSELAQNANNCFGMKKSLSGNTWGGSAWDGTSIYTKKTQEYENGAYVTVSADFRKYPSVEKSIADHSAYLLGAKNGAKLRYAGLKGCTDYKKAVQIIKDGGYATSPTYVENLCSIIEKWKLTQYDVANAGTAEVWYRVRKTWADAASQKGAFHNLANAKKCADENAGYSVFDESGKNLYTGKQTAFQPYLVKVSVSDLRIRKGPGTDNAKTGKYTGTGVFTIVEEADGPGASRWGLLKAYQKNRDGWISLDYAQRV
Physico‐chemical
properties
protein length:494 AA
molecular weight:52922,8 Da
isoelectric point:9,09
hydropathy:-0,40
Representative Protein Details
Accession
4kbYu
Protein name
4kbYu
Sequence length
490 AA
Molecular weight
54611,79970 Da
Isoelectric point
8,52725
Sequence
MKIQTQYLTTNNSYDTNTPEAIVVHNTDNFKSTADAKAHAEGLKAGYMSGMSWHIVTDDKAAYQCLPYNRGAWHVGVNYGGKLFGKINNRNSICVEMCVNAGYDYEKAFQNTVDVVKQLMKMHGIPADRVYQHYDICAKNCPSQIRAKGDWNRFKQMIGASGTDYNPQTEIQVDQYYRVRTSWENSASQLGAYQILKNAIDHCPAGYTVFDWNGKPVYTNEAKGTQAVSMNGMAEAEKIKFMAPLYQKVAKETGLLASVGLAQAWLESGGGTTDLAQNANNMHGMKCSLSGNTWPGSTWDGVSKYNKRTQEQDKNGNPYYVYADFRKYPCMEDSVADRAAYYLGAMNGSVRRYPGIENIKTAEGQIRAIKAGGYATDINYVSKLMNIVNRFNLTQYDVPADPQPTPEPTPTPEPSVIYRVQVGAYEKRGRATDCASTTEKRSGYKCFTEKATDGLYHVYCGSFEDKANAWQRKDALEKIAIPAIIKEVAK
Other Proteins in cluster: phalp2_3502
Total (incl. this protein): 91 Avg length: 496,8 Avg pI: 8,57
Protein ID Length (AA) pI
4kbYu 490 8,52725
13CXa 508 9,23479
13Dkt 511 8,12020
13t5n 497 9,14196
197sk 498 9,06408
1FVgF 497 9,17039
1FzDt 498 8,43841
1Hspc 496 9,07749
1cMOJ 517 5,81772
1cMhE 385 8,11130
1cunL 496 9,13590
1jG06 518 8,95068
1n0Mn 514 9,12919
1p0Fa 501 6,80734
21C1m 516 8,98852
21PFd 499 9,23318
21PdU 497 9,12365
21gTk 516 9,17954
21jIb 497 9,27134
21kH0 496 9,26928
21nFc 508 6,46858
21rqg 522 8,74954
233Kr 667 9,26735
23AmB 518 6,11885
23LQH 510 8,56561
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_4202
24Fe2
 14 46,6% 407 2.194E-146
2 phalp2_35371
18KG
 17 48,9% 386 3.263E-141
3 phalp2_781
23EGH
 9 37,3% 485 5.874E-121
4 phalp2_1523
24Dzx
 9 31,8% 505 5.505E-115
5 phalp2_27134
2Vo7e
 4 32,2% 475 6.446E-111
6 phalp2_15411
21scl
 1 33,6% 582 3.397E-88
7 phalp2_30597
6byCR
 1 26,9% 501 1.686E-85
8 phalp2_2693
76oFz
 7 32,8% 493 6.623E-79

Domains

Domains
Ami2
Unannotated
GLUCO
SPOR
Representative sequence (used for alignment): 4kbYu (490 AA)
Member sequence: 13rdU (494 AA)
1 490 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510, PF01832, PF05036

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4kbYu) rather than this protein.
PDB ID
4kbYu
Method AlphaFoldv2
Resolution 89.00
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50