Protein

Protein accession
16ybd [EnVhog]
Representative
6REqE
Source
EnVhog (cluster: phalp2_26018)
Protein name
16ybd
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MNEQEIQQAHDLIVAIREGLDKLDQLIQTPFDLTQAQIIPAPLPSTGFQLSHKSRNELQGVDSRLVECVEMALFNFTEVDFMVFDGLRTQEEQFDNVRRGVSKTMNSKHLTGHAVDLVPIIGGVPKWDWEGCAKIAYAMDRAATHLGYADLITWGGAWDRTLGDYNYGKTDYLKAVEEYKQRHEGPDFIDGPHFEIKKGE
Physico‐chemical
properties
protein length:200 AA
molecular weight:22667,3 Da
isoelectric point:4,97
hydropathy:-0,45
Representative Protein Details
Accession
6REqE
Protein name
6REqE
Sequence length
184 AA
Molecular weight
20751,51410 Da
Isoelectric point
6,77557
Sequence
LTIPYYRVHFQLIREVSPKRKPPGSAVAAFFVPDYPATVLLHFLPGHAPGFLFLEVAMPFKLSSRSLSRLSGIHDDLFSVVERAIQITEVDFTVLEGLRSKSRQKELFDSGASTTMNSRHLTGHAVDLGAWVTGGVRWDWPLYYKIADAMKHAADELGIPLEWGGDWETFKDGPHFQLPWKAYP
Other Proteins in cluster: phalp2_26018
Total (incl. this protein): 256 Avg length: 145,2 Avg pI: 8,43
Protein ID Length (AA) pI
6REqE 184 6,77557
1076n 122 9,04699
10R6G 157 5,52330
10UId 143 5,30839
11fpK 154 6,20872
16TwD 153 9,24884
16ZEv 129 10,31541
17crj 156 7,02691
18oyP 122 7,89630
1AQ32 126 8,96144
1CswN 155 9,91145
1HTrN 135 9,03990
1KLkf 133 5,92151
1KQh2 122 9,59201
1LCyq 122 9,46539
1LoiS 122 5,57377
1NRYm 161 9,88128
1NTl0 157 9,74422
1NuDM 158 9,78761
1QYzJ 150 6,42618
1a0wD 163 9,38919
1b145 162 9,35947
1cy1k 108 9,75215
1dLT4 158 9,62237
1fVsv 155 8,52525
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_13949
8Fkan
 8452 70,8% 127 2.505E-74
2 phalp2_15106
eKg9
 268 56,8% 139 4.231E-63
3 phalp2_1400
1mRwO
 571 50,0% 154 8.361E-57
4 phalp2_33495
7ykGZ
 86 50,6% 156 3.326E-54
5 phalp2_28914
5wnp3
 97 47,0% 155 2.793E-49
6 phalp2_27432
4Rvdx
 79 50,3% 133 4.750E-48
7 phalp2_6390
3Fng
 1 47,5% 122 4.373E-44
8 phalp2_15082
1DVW
 42 52,1% 117 1.539E-43
9 phalp2_1169
8ySPz
 5 42,2% 154 3.578E-42
10 phalp2_18798
1dhYs
 557 42,1% 147 1.138E-40

Domains

Domains
PET_M15
Representative sequence (used for alignment): 6REqE (184 AA)
Member sequence: 16ybd (200 AA)
1 184 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF13539

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (6REqE) rather than this protein.
PDB ID
6REqE
Method AlphaFoldv2
Resolution 84.08
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50