Protein

Protein accession
17smd [EnVhog]
Representative
2KMCh
Source
EnVhog (cluster: phalp2_6928)
Protein name
17smd
Lysin probability
96%
PhaLP type
endolysin
Probability: 90% (predicted by ML model)
Protein sequence
SYREAVIKYVINNEGYENQVYTDTTGNKTVGIGHKLVGQKYKVGDYVSDELIYDWFIDDITIAIKCATKYHLSTNSNVNIVLTDMAFNLGCSGLRQFKLLRKHLNNGNYVMAVRAIKYSIYYNQITNRANRNIALINRR
Physico‐chemical
properties
protein length:139 AA
molecular weight:15996,1 Da
isoelectric point:9,41
hydropathy:-0,33
Representative Protein Details
Accession
2KMCh
Protein name
2KMCh
Sequence length
170 AA
Molecular weight
18744,15440 Da
Isoelectric point
5,38836
Sequence
VDELLMSMIERHEGRRNKPYRCPAGHLTIGVGHNMEARPLPLDMQAFLDKHGYITDGMVDQLLIADLADAILDAAGAVGAQTWESLNLARQYAIIDMAFNLGGGGLQKFKRFLAAVRAGEWTRAADEIRASRYYRQLGGDPAGADDGNLERPEEIMRMIETGRFVEAKAA
Other Proteins in cluster: phalp2_6928
Total (incl. this protein): 358 Avg length: 148,4 Avg pI: 7,23
Protein ID Length (AA) pI
2KMCh 170 5,38836
11IlD 144 8,99942
11bAU 166 7,76991
142xR 148 4,67713
14G4o 161 8,74193
14H5Q 165 7,81887
14JYU 148 8,58205
14LWo 163 8,98311
14UGJ 169 5,82335
14Xou 174 9,20320
14zmA 188 9,33678
14zn9 168 9,02101
15Ae9 152 9,14466
15wPQ 159 6,64746
15xTK 152 8,97898
16Z1q 147 8,75850
16fvf 142 5,57877
18IgL 153 5,93566
18JGO 153 9,11726
18TnR 156 8,16133
1A5Mf 141 4,77018
1ASWo 141 5,45480
1AvTi 137 4,60824
1Bee4 141 5,24177
1Fv27 145 4,65070
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_32797
2yPO8
 5731 34,3% 160 3.742E-55
2 phalp2_9780
80F6A
 154 36,0% 161 4.662E-54
3 phalp2_8442
12q1i
 28 37,5% 136 6.390E-54
4 phalp2_17008
8jNgs
 3526 33,9% 159 3.849E-52
5 phalp2_27968
RI1z
 5083 33,7% 163 1.395E-48
6 phalp2_16834
1uDRT
 24 31,4% 162 6.743E-48
7 phalp2_6283
6Psj3
 6 30,1% 159 4.467E-47
8 phalp2_24213
2KXlJ
 83 33,3% 171 1.150E-46
9 phalp2_24334
3Qw2p
 463 30,5% 170 3.339E-44
10 phalp2_14448
4FjnP
 18 29,0% 162 2.210E-43

Domains

Domains
GH24
Representative sequence (used for alignment): 2KMCh (170 AA)
Member sequence: 17smd (139 AA)
1 170 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (2KMCh) rather than this protein.
PDB ID
2KMCh
Method AlphaFoldv2
Resolution 94.68
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50