Protein

Protein accession
17xJ8 [EnVhog]
Representative
iKDC
Source
EnVhog (cluster: phalp2_28209)
Protein name
17xJ8
Lysin probability
99%
PhaLP type
endolysin
Probability: 89% (predicted by ML model)
Protein sequence
MLIKKGDNNLNVKHLQQKLGLKEDGIFGRNTEKAVIRYQLSKSLRVTGIVDSEMWVLLFNAKPGPIEAIDEDTDIEGQYFRTEYDQLIHKHYLPKGEYIAGPIENEYMFLHHTAGWHNPYNCIDHWGRDSRGRVATEFVLGGRNHKDGSDEFDGVMVQAFPEGGYGWHLGRTQSGWMNRHSVGLEICSFGKLDSNKKTYIGTTPCEEEIATLKEPFKGSLYYHKYSDKQIKETEKWIRYVGERDGIDVRIGLKQFIQKHGPIKGFGFQMDATLGNVKGLLTHTNVRTDKSDCYPDPNFVDMILSL
Physico‐chemical
properties
protein length:305 AA
molecular weight:34892,1 Da
isoelectric point:6,50
hydropathy:-0,62
Representative Protein Details
Accession
iKDC
Protein name
iKDC
Sequence length
328 AA
Molecular weight
37922,13200 Da
Isoelectric point
6,16415
Sequence
MSTLISSVQRALHVSESGFLDSTTQSAIKNFQMRVSLRPTGELDDNTIKKLKTHASLNISETADTTAIGTYEMNPNEIDYNESMNYTSDMFETLYTNNIDIKKRYLDADEYVNEYTPKSMIFLHHTAGWNDPYHTIKWWNDDARGRIATEFVIGGINFETDEAKHDGVIVQAFPEGNWAYHLGGAKRHGITSKMVKESVGIEICNFGWLTERYGKYYTYTGNEVPSKYVTKLDKPFRGYEYWHSYTDKQLKSLEGLIKHLGRKYNIDITRGIKEELAIGFDKHHAFEYKDSFMLYPAPGLYSHTNVRKDKSDVYPHPKLISMLENLYY
Other Proteins in cluster: phalp2_28209
Total (incl. this protein): 1185 Avg length: 299,4 Avg pI: 6,80
Protein ID Length (AA) pI
iKDC 328 6,16415
113ka 305 6,37423
11VHe 310 6,79331
11mC7 319 7,13849
122sf 305 8,23817
124G2 296 6,10720
124WL 293 5,71569
12fkO 293 8,70454
12pdl 306 6,11095
14mS4 292 8,24655
156D1 224 8,71511
15SIR 296 6,07725
16o1m 297 6,51099
17BU3 305 6,40896
17bCw 306 6,31933
17lJI 305 6,60261
17yAs 307 6,70276
18I7T 307 7,17128
19QUR 294 6,63711
1AHIf 291 7,08642
1AdAU 292 5,71530
1Amab 306 5,74525
1Ascd 293 6,21127
1BqE 317 5,06375
1CYYl 304 8,26538
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_35105
5kI8h
 32 36,6% 333 5.722E-99
2 phalp2_11040
7EhAU
 132 50,7% 209 1.321E-94
3 phalp2_14005
87m9T
 1656 41,4% 227 1.187E-70
4 phalp2_4134
1HOCY
 3 35,9% 231 8.138E-65
5 phalp2_28796
7G1A0
 2 26,7% 284 1.705E-45
6 phalp2_33891
1NRwq
 35 32,3% 232 2.092E-42
7 phalp2_13122
8iXkc
 2 32,4% 234 8.645E-39
8 phalp2_30789
f0zu
 4 24,7% 214 6.402E-23
9 phalp2_17917
Rszt
 866 25,4% 216 1.806E-16

Domains

Domains
PG_1
Ami2
Representative sequence (used for alignment): iKDC (328 AA)
Member sequence: 17xJ8 (305 AA)
1 328 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471, PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (iKDC) rather than this protein.
PDB ID
iKDC
Method AlphaFoldv2
Resolution 84.87
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50