Protein

Protein accession
1HDo2 [EnVhog]
Representative
5jcjr
Source
EnVhog (cluster: phalp2_11114)
Protein name
1HDo2
Lysin probability
97%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MPLRTRYFDLIEQVAAKHDLDPLLVEAVVVKESSGNADAFRFEPDFYNRYLKLSPGWEWARKKYANPRRISSSYGLMQVMFPVAVEDGYPKTDPPELMFLPEVALEYGCRRLRRLREWSEEAGPTVDPHQRLLASLAAYNGGKGSNLPGTQPLRNGSYARAVLQIYTQLKVEHGGQ
Physico‐chemical
properties
protein length:176 AA
molecular weight:20015,6 Da
isoelectric point:8,62
hydropathy:-0,50
Representative Protein Details
Accession
5jcjr
Protein name
5jcjr
Sequence length
182 AA
Molecular weight
20576,40660 Da
Isoelectric point
7,80333
Sequence
MKLLAVLMSLVLTKEPTPKPYEIAIRGYATQYGLAREVVAAVILQESGGNRYAFRYEDGFFEKYLAHKLPSSLPGPFHKNISFDSEIRLRAVSYGLMQVMGETAVEHGFEGYLPELFEPEKNIQIGCKVLSENLKHYRGDYRKALSAYNAGRNWVDQHGATAYADKVIARIESKEIEKLITL
Other Proteins in cluster: phalp2_11114
Total (incl. this protein): 291 Avg length: 165,0 Avg pI: 7,52
Protein ID Length (AA) pI
5jcjr 182 7,80333
1060G 157 7,00844
10tbX 183 9,51961
14BR9 147 7,65470
14iqu 158 9,05273
14vHt 217 8,83534
15fhO 157 8,66837
15zt 160 8,75985
16ORB 174 6,13454
16QRC 168 7,89340
16dSs 164 8,33836
1CLon 161 9,19263
1DNFD 183 5,84171
1DVqB 169 9,05428
1E8GV 184 4,83907
1HM4L 200 5,21824
1IS2Z 163 8,80865
1J6bW 162 7,90816
1J8Y6 160 8,78435
1KBeV 161 8,45318
1KBsU 155 8,82999
1LTV2 148 8,23830
1LckU 160 7,90835
1Leak 167 7,65135
1LgeJ 160 8,78435
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_3406
3Pi2s
 331 37,8% 156 6.463E-52
2 phalp2_20310
2k1Qv
 26 34,3% 160 9.216E-46
3 phalp2_9329
7BCrF
 25 31,4% 178 1.590E-41
4 phalp2_27050
2cnxE
 19 33,6% 187 1.049E-40
5 phalp2_36181
6Xpof
 3 35,2% 156 1.299E-39
6 phalp2_22364
ht2E
 5 26,4% 159 1.774E-27
7 phalp2_20583
4DtTC
 15 29,0% 162 8.492E-27
8 phalp2_37089
16u4b
 9 29,3% 150 2.574E-22
9 phalp2_25771
7CoqA
 3 26,1% 153 8.973E-22
10 phalp2_9502
Zsqg
 18 29,7% 158 7.966E-21

Domains

Domains
SLT
Representative sequence (used for alignment): 5jcjr (182 AA)
Member sequence: 1HDo2 (176 AA)
1 182 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01464

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5jcjr) rather than this protein.
PDB ID
5jcjr
Method AlphaFoldv2
Resolution 92.05
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50