Protein

Protein accession
1Ljrd [EnVhog]
Representative
62TOB
Source
EnVhog (cluster: phalp2_28972)
Protein name
1Ljrd
Lysin probability
99%
PhaLP type
endolysin
Probability: 95% (predicted by ML model)
Protein sequence
MRLDQKYKTLFKKYGINTPLRTAHFLAQLHHESGGFKYLKELGNDAYFLKYEGRKDLGNTKAGDGAKFKGRGYIQITGRSNYTELSKELNIDFVNNPQLLEQEVNAVLSALWFWHKKKLNIFADEDNISTITKRINGGFNGIEDRKQLLQKYKELLLV
Physico‐chemical
properties
protein length:158 AA
molecular weight:18303,7 Da
isoelectric point:9,54
hydropathy:-0,63
Representative Protein Details
Accession
62TOB
Protein name
62TOB
Sequence length
173 AA
Molecular weight
19767,17450 Da
Isoelectric point
8,52519
Sequence
MDERFERENYLLQFLQDKQYPPIAIAVLMAQAKLETDRFKTMKEYGNAAYFSRYDGRKDLGNVKPGDGARFRGRGYIQITGRNNYDKVGKFLNIDLLTFPELAEQPDVAVQIFDWFIHFGNRFKDGRNVLDCAKEGDIVGASKLVNGGVNGLKERKQYFAEYKEKLGVDGAGF
Other Proteins in cluster: phalp2_28972
Total (incl. this protein): 63 Avg length: 185,1 Avg pI: 8,40
Protein ID Length (AA) pI
62TOB 173 8,52519
18FPa 158 9,57886
1KBBO 197 8,69242
1KI2c 196 8,65922
1KIu7 196 8,37027
1KKFq 197 6,52804
1KLjs 180 8,96351
1KMDL 196 8,66927
1KPeE 201 8,80305
1KUlV 196 7,66277
1Kt2h 196 7,70097
1KwZs 199 8,58862
1LZPI 195 9,09709
1yElX 158 9,41549
25FUI 203 9,33555
2A26K 188 9,06111
2LnCN 181 8,90342
2ha6f 201 8,80298
2hm96 201 8,68172
2nGSe 173 8,74489
3AUky 178 5,90940
3I8Yo 164 8,94507
3MOM3 195 10,07404
4CVlI 178 6,42431
4IN7v 177 9,30048
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_1654
8rD3A
 4011 40,5% 148 7.087E-57
2 phalp2_22262
7pbAz
 301 41,9% 143 2.501E-56
3 phalp2_8404
IwNf
 80 38,0% 150 2.396E-49
4 phalp2_23254
4Uvr8
 48 35,7% 176 4.083E-48
5 phalp2_13837
7g328
 191 38,1% 152 1.440E-47
6 phalp2_37433
2Fv3r
 11643 30,6% 176 9.747E-44
7 phalp2_28029
6WPz8
 130 42,6% 150 1.211E-42
8 phalp2_5234
8cPFI
 3482 32,3% 176 4.266E-42
9 phalp2_2766
23eb
 36 32,9% 167 2.314E-39
10 phalp2_35292
6WQVR
 1 36,3% 157 3.170E-39

Domains

Domains
Unannotated
Representative sequence (used for alignment): 62TOB (173 AA)
Member sequence: 1Ljrd (158 AA)
1 173 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (62TOB) rather than this protein.
PDB ID
62TOB
Method AlphaFoldv2
Resolution 76.63
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50