Protein

Protein accession
1Lqdu [EnVhog]
Representative
4f5QX
Source
EnVhog (cluster: phalp2_31553)
Protein name
1Lqdu
Lysin probability
98%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
VAYQKNWVASPNYTPGPQTQAAYGRPRSISGGAGHWWNLPSLAGNHDGIVSFMANPARQAAPHAVLSDARVTEMVRDSDTAWCTAGANPYTFAIEIDPRIMYKWGYDNPSAAQRAHGERIFETLCEYIADKGYHNLPWKPHNVWAPGTQCNPIPYDQVMARAKEIWQQKYGQPAPKIQWQENLKKWDQPRTLYAADDQTPLRNLGYVTEVIKNFGKATPFEIAAETMVNGNKYLLTRYAYENGTGQGFDVYELQDSDPNAVPEWVKNIVDTADVKLFVLPAAGTPVVDLNTGNAIPESVIAKGTAVDIAKTTTVGGKQYLISSYSASRGMANGILASDLGALVEPPKQEKPEWLKNLEDITDVTMYTRAEVPLVNLVDGSTIKMLPINTPVEIAEATEVAGLEYFISVYAAAKDQPNGILVAHLDKDPIKAPDEPAEPAPEQPSLEQRVGILEAFMNAIKALLSKIGINI
Physico‐chemical
properties
protein length:470 AA
molecular weight:51564,7 Da
isoelectric point:5,13
hydropathy:-0,33
Representative Protein Details
Accession
4f5QX
Protein name
4f5QX
Sequence length
384 AA
Molecular weight
42315,17970 Da
Isoelectric point
5,44150
Sequence
MASYKYITNYDSPNYTPGSSVKGVFGYPREIKGFTYHWWGDPNNHPTFEGVVSWLCRNGGNTSAHYVVEAGRVACIVSPYDAAWHSGNALGNATTLGIECNPRALDGDYTTIAQFSAQLIDAFGDRLKYKHSDWQATQCPGVYDIGRIDRESYDWISNAEWGDVSPKTSTPIPTPPPVVPAPVPSPIKAEWVVNLKDYKGPQLQVVKADGARRVNLITGEEFSEVIPRGTNIDIVKETKVSGVLYYISHYSSNANAAIGIRADAMGIPATPPVVEKPEWLNNLEDITDQVFWTRSETSVLNLADGTTVKTLPINTPVRITHATRIVGNDILVLEGGVTGIDKLYLSDKPITNPDSDLAIETNRIVKFIFDIVTKILDKLNNIFR
Other Proteins in cluster: phalp2_31553
Total (incl. this protein): 101 Avg length: 402,2 Avg pI: 6,65
Protein ID Length (AA) pI
4f5QX 384 5,44150
14kes 463 5,74002
18Xtk 458 7,06039
1ISbq 476 7,64811
1L5yV 474 7,63947
1Lloa 469 6,28562
1cJwb 242 5,38080
1cvwz 424 7,15514
1nsNI 242 5,41564
2bnfp 421 5,76401
2f35g 425 5,30873
3P6Jv 320 5,33084
3bxi9 448 8,97988
3erDP 473 6,18519
3rl83 477 8,17177
3xOnt 449 5,57104
4FP4O 433 5,54018
4FUuc 288 7,64811
4Jj53 416 8,64555
4YIIf 469 6,28681
4gLAX 474 6,36178
4kSWw 318 5,90406
4kwHS 474 6,97303
4uHKq 467 9,45547
5MZTr 314 5,52727
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_10949
4Jkr6
 29 27,5% 316 6.565E-58
2 phalp2_16214
4K5QO
 38 23,7% 299 1.204E-22
3 phalp2_1799
36BX3
 4 23,5% 301 9.842E-21
4 phalp2_34085
8plKk
 11 18,9% 401 1.319E-20
5 phalp2_872
8dsHX
 35 23,8% 294 2.443E-19
6 phalp2_36626
25FVY
 29 19,8% 362 2.542E-17
7 phalp2_6714
1Z5Qj
 1 19,1% 266 3.705E-08

Domains

Domains
Ami2
Unannotated
Unannotated
Disordered region
Representative sequence (used for alignment): 4f5QX (384 AA)
Member sequence: 1Lqdu (470 AA)
1 384 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (4f5QX) rather than this protein.
PDB ID
4f5QX
Method AlphaFoldv2
Resolution 84.52
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50