Protein

Protein accession
1Mcsn [EnVhog]
Representative
5GMvl
Source
EnVhog (cluster: phalp2_2498)
Protein name
1Mcsn
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MSSSISQDGLNMIVNFEGFRQDAYKDVAGRWTIGYGCTDPEYAMPGGHITKEKAMELLRADVNLRTMAVRRACDVPPNQHQLDAMISLCYNIGEGVFRKSSVVALHNKRDFVGASDAFLKWDKYTDPATGKLKPSAGLSRRRKAEAAMYLQENNHLPEPRILKVKPEATPLSRSRTLWGAGVAAGGTAATQVIDQVQMGISALTPLASYLSFARWIILFMVMSSIGLVVYSKIQSHKKGK
Physico‐chemical
properties
protein length:240 AA
molecular weight:26424,2 Da
isoelectric point:9,58
hydropathy:-0,20
Representative Protein Details
Accession
5GMvl
Protein name
5GMvl
Sequence length
229 AA
Molecular weight
24069,22380 Da
Isoelectric point
7,00111
Sequence
MKLNAAGIALIKEREACRLEAYLCPGGVWTIGYGHSGSEIHEGLAITPADAEALLHADLLRIDACVARLCPSATESQHAAMVCLAYNIGCGAFSRSSVARLHNAGRTAEAAQAFALWNKARGRVLPGLVARRAAEVALYLADDGTAAGFADGEKPLSESRTLAGSSLGGAAVGATALGELASQVDAWRSQTLALLPYFESLRWALLVLILAGLSLAAYARWHDRREGRS
Other Proteins in cluster: phalp2_2498
Total (incl. this protein): 297 Avg length: 206,8 Avg pI: 8,90
Protein ID Length (AA) pI
5GMvl 229 7,00111
12FlV 144 9,15827
1512k 221 9,86490
165QR 227 9,11597
174j2 172 5,96829
17IKU 183 8,94526
191vm 233 9,32169
1940B 183 7,93111
1BM2I 226 9,29842
1J499 180 9,59104
1JNAo 221 9,64578
1K6KV 225 9,07465
1KTSs 147 9,51110
1Kzwe 227 9,65635
1MnMv 233 8,65831
1aPGF 233 9,61412
1aT32 237 9,01753
1anqu 229 5,79140
1azzV 230 9,13216
1fu3d 240 9,38636
1lB93 229 9,04551
1lJlp 237 6,95012
1lKYe 239 9,22396
1lvp1 142 9,35676
1om1Y 178 9,89656
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_26378
1q5mp
 207 44,5% 240 7.059E-74
2 phalp2_33221
5jbqV
 447 53,4% 144 3.458E-70
3 phalp2_28113
7zmZV
 50 51,0% 149 1.868E-67
4 phalp2_29738
1pBjt
 830 36,0% 247 3.505E-67
5 phalp2_2632
6RhYr
 14867 52,8% 142 3.923E-65
6 phalp2_40579
4SZ2W
 11 36,8% 217 1.908E-61
7 phalp2_10966
4MkR6
 70 43,5% 202 1.258E-60
8 phalp2_6830
8n5Jv
 121 48,3% 149 8.295E-60
9 phalp2_2176
3Yhf4
 930 46,7% 154 5.467E-59
10 phalp2_126
5jCCA
 637 45,4% 143 7.486E-59

Domains

Domains
GH24
Disordered region
Representative sequence (used for alignment): 5GMvl (229 AA)
Member sequence: 1Mcsn (240 AA)
1 229 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF00959

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (5GMvl) rather than this protein.
PDB ID
5GMvl
Method AlphaFoldv2
Resolution 79.78
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50