Protein

Protein accession
A0A2P1CCB1 [UniProt]
Representative
3cumx
Source
UniProt (cluster: phalp2_24275)
Protein name
Putative endolysin
Lysin probability
100%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MKITKDILITGTGCTTDRAIKWLDDVQAAMDKFHIESPRAIAAYLANIGVESGGLVSLVENLNYSAQGLANTWPRRYAVDPRVRPYVPNALANRLARNPVAIANNVYADRMGNGCEQDGDGWKYRGRGLIQLTGKSNYALFAEDSGMDVLEKPELLETPAGASMSSAWFFWRNRCIPMAESNNFSMVVKTINGAAPNDANHGQLRINRYMKTIAAINQGS
Physico‐chemical
properties
protein length:220 AA
molecular weight:24157,2 Da
isoelectric point:8,76
hydropathy:-0,30
Representative Protein Details
Accession
3cumx
Protein name
3cumx
Sequence length
303 AA
Molecular weight
33373,67130 Da
Isoelectric point
9,00586
Sequence
MKSLLRTIIEYLRSRRSEPVAISATPMHTEPTLVEPPTTTPAVLDTAHFSENEIDGQLVALVVETPIVEAVSSPIKEASKVEDVEINEIVAASPVAKKPIITEAQFVKLFPTGRKDLVPFLNNFMDIGNINTELRASHFLAQCAQESGGFRVVTENLNYSKEGLLKIFKKYFLTDAEAAKYARKPEAIANKVYANRMANGNPSSGDGFRFRGRGLIQLTGRANYTAYAADRKITVPEAVDFCTRGGGIVDSAVWFWTKNNCNTIADTNNVTLLTKRINGGSHGLDGRRAYFESIRKVIASNFK
Other Proteins in cluster: phalp2_24275
Total (incl. this protein): 91 Avg length: 220,7 Avg pI: 8,70
Protein ID Length (AA) pI
3cumx 303 9,00586
A0A6H2A9W0 220 8,75772
A0A5P1KVB5 220 8,42300
B5M9U5 220 8,75772
A0A0S1WHA3 220 8,75727
A0A0F6WDH7 220 8,77268
A0A0U2CHI1 220 8,75772
A0A455XIS8 220 8,99033
A0A0A1IVD1 220 8,75772
A0A0F6SJF7 220 8,75772
A0A0F6WCZ4 220 8,75727
A0A0H4MLB3 220 8,75772
A0A0S3UG86 220 8,75772
A0A0U2CI93 220 8,75772
A0A0U4VUI2 220 8,75772
A0A0U5A9C0 220 8,75772
A0A0U5ARH0 220 8,75772
A0A0U5ATD9 220 8,75772
A0A142FGF6 220 8,75772
A0A1J0MI02 220 8,75772
A0A1X9I848 220 8,75772
A0A2I7SBQ5 220 8,75772
A0A2K8HS77 220 8,75772
A0A2K8I4D4 220 8,75772
A0A345AXF6 220 8,75772
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_37433
2Fv3r
 11643 54,0% 198 5.109E-72
2 phalp2_39259
3ZvQn
 35 49,4% 196 1.965E-69
3 phalp2_33370
6IDED
 552 52,7% 182 2.688E-69
4 phalp2_5234
8cPFI
 3482 50,9% 204 8.423E-68
5 phalp2_33198
53YTE
 21 47,4% 219 1.576E-67
6 phalp2_22433
K5Pz
 97 42,2% 199 7.773E-59
7 phalp2_28210
jj2c
 60 46,6% 206 2.204E-51
8 phalp2_13832
7earN
 3 43,4% 191 2.663E-50
9 phalp2_24118
8iWmx
 1 34,3% 198 1.374E-40
10 phalp2_26325
1bAUE
 20 34,8% 201 5.632E-39

Domains

Domains [InterPro]
Disordered region
Unannotated
Representative sequence (used for alignment): 3cumx (303 AA)
Member sequence: A0A2P1CCB1 (220 AA)
1 303 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_LS1
[NCBI] 		2099648 Pbunavirus > Pbunavirus LS1
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
MG897799 [NCBI]
CDS location
range 55651 -> 56313
strand -
CDS
ATGAAAATCACAAAGGATATTCTTATCACCGGAACCGGGTGCACCACGGATCGGGCGATCAAGTGGCTGGATGACGTCCAGGCGGCCATGGATAAATTCCACATCGAGTCGCCGCGAGCCATTGCGGCCTACCTCGCCAACATCGGAGTCGAGTCCGGTGGACTGGTGAGTCTGGTGGAGAATCTCAACTACAGCGCCCAAGGACTGGCTAACACTTGGCCGCGCCGGTACGCAGTGGACCCGCGCGTCCGTCCGTATGTGCCGAACGCTCTGGCGAACCGCCTAGCTCGCAATCCGGTCGCCATCGCCAACAACGTGTACGCTGATCGCATGGGTAATGGCTGCGAGCAGGACGGGGACGGCTGGAAGTATCGCGGTCGCGGCCTGATCCAGCTGACCGGGAAATCGAACTATGCCCTGTTCGCCGAAGACTCCGGTATGGACGTTCTGGAGAAGCCGGAGCTGCTGGAAACTCCGGCCGGCGCGTCGATGTCTTCGGCCTGGTTCTTCTGGCGCAATCGCTGCATCCCCATGGCGGAATCCAACAACTTCTCCATGGTCGTGAAAACCATCAACGGCGCCGCGCCGAACGATGCGAACCATGGCCAGCTCCGGATCAACCGTTATATGAAGACCATCGCCGCGATCAATCAAGGCTCCTGA

Gene Ontology

Description Category Evidence (source)
GO:0004568 chitinase activity molecular function None (UniProt)
GO:0006032 chitin catabolic process biological process None (UniProt)
GO:0016998 cell wall macromolecule catabolic process biological process None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
A0A2P1CCB1
Method AlphaFoldv2
Resolution -
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
PDB ID
A0A977KGG9
Method SMR
Resolution –
Chain position –
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (3cumx) rather than this protein.
PDB ID
3cumx
Method AlphaFoldv2
Resolution 77.79
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50