Protein

Protein accession
A0AAE9W706 [UniProt]
Representative
4RjQQ
Source
UniProt (cluster: phalp2_15957)
Protein name
Endolysin
Lysin probability
100%
PhaLP type
endolysin
Probability: 97% (predicted by ML model)
Protein sequence
MLTEQLDTSKFKIYKELDDLVVVDYRDNLKRLRGYGKRPEKVSLVVYHHSAGNENCDWTKDPQWQEFVDGVNHWHTKGLGWPACGYHIMVPYSALEHNGKNCVILANALGTMSYHTGRGRNAYGIGVCFQGNFAGPVNDSGLRPSDFQKECAHSIWLSWLQPDFNLADYQLTGHFNHGKQACPGEDLADIIYAHQMGFTLGGMLVQ
Physico‐chemical
properties
protein length:206 AA
molecular weight:23233,9 Da
isoelectric point:6,23
hydropathy:-0,43
Representative Protein Details
Accession
4RjQQ
Protein name
4RjQQ
Sequence length
367 AA
Molecular weight
41037,97740 Da
Isoelectric point
8,60842
Sequence
VDLFVGSNFVVRDLRPQIDRIRGDGYPYGWRGKGLAWSRAPRTIRGVEYHQTAGSLNPGEAGPITTARFVTANPWFRCPTCGRTWEGTVMYPYEACSSCKDDEGQPVLGKDLGRGRGWPKMCYHLFVPWAPLLDDAHRFIVYQCLDWYERSWHSNAEGNTYNVAVAFQGLYRSRHNPHFVPWPETDGQPSVAQQAIARPLWYEYLRIELKLAAAGLRGHFQYGKPTCPGDMLESIVVEVSGAKVETLTLPEIAPSAFPTWESRQRFLLSLGFDLGSYGPAKDGVDGKPGIRTRAAIEVIQRMHAIQVTGNWDPETDRVASVLQPLPGEIKQYVSSALPPSPVKASDELEEPAVSGSKPFGGRRRHRR
Other Proteins in cluster: phalp2_15957
Total (incl. this protein): 2 Avg length: 286,5 Avg pI: 7,42
Protein ID Length (AA) pI
4RjQQ 367 8,60842
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_19673
4B2DP
 5 33,8% 310 3.358E-38
2 phalp2_37090
174wy
 2 30,4% 243 8.068E-25

Domains

Domains [InterPro]
Unannotated
PG_1
Disordered region
Representative sequence (used for alignment): 4RjQQ (367 AA)
Member sequence: A0AAE9W706 (206 AA)
1 367 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodobacteraceae phage LS06-2018-MD06
[NCBI] 		3003839 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
CDS Source ID
[NCBI]
CDS Source
OP947162 [NCBI]
CDS location
range 12162 -> 12782
strand +
CDS
ATGCTTACTGAACAACTAGACACTAGCAAATTTAAAATCTACAAAGAACTTGACGACCTTGTCGTTGTTGACTATCGAGACAATCTAAAGAGACTGCGCGGGTACGGCAAAAGACCAGAAAAGGTTTCTCTCGTTGTATACCATCACAGCGCCGGCAATGAAAACTGTGACTGGACCAAGGACCCGCAATGGCAAGAGTTCGTAGACGGTGTTAATCACTGGCATACCAAGGGTCTTGGCTGGCCGGCCTGCGGATATCACATTATGGTGCCCTACTCTGCGCTGGAGCACAACGGCAAAAACTGTGTCATTCTGGCTAACGCTCTCGGTACAATGTCGTACCATACAGGCCGTGGCAGAAATGCTTATGGAATCGGTGTATGCTTCCAGGGTAACTTTGCAGGACCGGTGAACGACAGTGGCTTGCGGCCATCGGACTTCCAGAAGGAATGCGCTCACAGTATTTGGCTTAGCTGGCTACAACCAGACTTCAACTTGGCGGATTATCAGCTGACAGGTCATTTTAACCACGGCAAGCAGGCATGCCCAGGAGAGGATCTAGCTGATATTATCTATGCTCATCAGATGGGTTTTACGCTTGGCGGGATGTTGGTGCAGTAA

Gene Ontology

Description Category Evidence (source)
GO:0001897 symbiont-mediated cytolysis of host cell biological process None (UniProt)
GO:0008745 N-acetylmuramoyl-L-alanine amidase activity molecular function None (UniProt)
GO:0009253 peptidoglycan catabolic process biological process None (UniProt)
GO:0042742 defense response to bacterium biological process None (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
A0AAE9W706
Method SMR
Resolution –
Chain position –
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (4RjQQ) rather than this protein.
PDB ID
4RjQQ
Method AlphaFoldv2
Resolution 81.12
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50