Protein

Protein accession
1RiCz [EnVhog]
Representative
d8Lo
Source
EnVhog (cluster: phalp2_26149)
Protein name
1RiCz
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MARSLKKLHADFRGPAEELIERVSLRGYTMRPFYTHRTVRQQAKLWRQSRSRVQIDAAISVLFREKANFLACILEGVGPQHGRWATNALPGQSWHNWRYALDCFLQIDGKANWDSGHEGYRVYAETAVDMGMTAGYYWRSRDAVHVQQTDGRVLDEYSWQEIDARMRA
Physico‐chemical
properties
protein length:168 AA
molecular weight:19578,9 Da
isoelectric point:9,39
hydropathy:-0,62
Representative Protein Details
Accession
d8Lo
Protein name
d8Lo
Sequence length
181 AA
Molecular weight
20207,16850 Da
Isoelectric point
8,56541
Sequence
MSKDLNDLAPTLHGICIEHLHISALEGIDMRILQTWRPLEKQARLYRSTRSIEEIRAKAKALAHLGCQHCADVLISVGPQLYPPWLQPGKHLTMAGPGESKHHKLDIFHGIWACAYDIGCFDKDGKYIQDGKHPDYVTAGRIGTGLGLQWLGEGTQKFKEAAHFQLKGLPGTKERIKLVVE
Other Proteins in cluster: phalp2_26149
Total (incl. this protein): 162 Avg length: 169,9 Avg pI: 7,55
Protein ID Length (AA) pI
d8Lo 181 8,56541
107bJ 173 5,02044
107xC 176 6,83332
16y4w 190 6,04712
17Y03 141 8,90761
17jDm 183 6,15841
18BIw 139 8,93404
19y56 176 10,19634
1E9BO 166 6,96360
1FQTw 186 9,22699
1HQbc 168 9,84821
1HSEP 188 8,83734
1I9Vs 170 5,34164
1Jaff 165 6,17979
1Jbyv 171 8,83218
1KH2j 169 5,30117
1Kl7i 141 9,48067
1LEcI 182 8,24037
1MUk4 176 6,05860
1QYMH 173 8,15159
1VnA6 175 8,70924
1Z0aH 179 7,66681
1azyU 139 8,58314
1ibBH 170 9,25929
1jlKd 183 7,01151
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_1337
15l6q
 1516 29,3% 167 3.497E-43
2 phalp2_32329
8CRp5
 10 22,1% 221 8.234E-39
3 phalp2_35414
f7cN
 32 24,2% 169 8.291E-30
4 phalp2_27726
6US3d
 23 23,2% 172 2.339E-27
5 phalp2_39989
1NC6w
 21 23,6% 165 2.564E-25
6 phalp2_33559
8Bkl8
 2 26,6% 150 1.675E-24
7 phalp2_15634
2Dd0a
 83 22,6% 168 1.495E-23
8 phalp2_23122
4DyQf
 2 29,8% 124 2.488E-22
9 phalp2_33807
1hNOs
 60 18,5% 167 2.488E-22
10 phalp2_627
1bpyM
 18 25,4% 169 2.488E-22

Domains

Domains
Unannotated
Representative sequence (used for alignment): d8Lo (181 AA)
Member sequence: 1RiCz (168 AA)
1 181 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (d8Lo) rather than this protein.
PDB ID
d8Lo
Method AlphaFoldv2
Resolution 94.94
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50