Protein

Protein accession
1Vrgb [EnVhog]
Representative
55Yxp
Source
EnVhog (cluster: phalp2_31984)
Protein name
1Vrgb
Lysin probability
95%
PhaLP type
endolysin
Probability: 86% (predicted by ML model)
Protein sequence
MSEMKTALTSPNKPPVNIDKAFDVLLAYEGFRPEAYKDTKGKWTIGVGHLIGDGSDAAYKKSPFYNKTLSRDAAIKLAKSELSDRLPKVVSLIGKGFFDMQPNTQRQLISSFYRGGITGSPKTLEHIRKGEFEKASKEFLDNDEYRAAVKSGSGVAPRMENLSKALLSEANKKTPSFEEAVEQRMLQ
Physico‐chemical
properties
protein length:187 AA
molecular weight:20739,4 Da
isoelectric point:9,35
hydropathy:-0,59
Representative Protein Details
Accession
55Yxp
Protein name
55Yxp
Sequence length
228 AA
Molecular weight
25479,08480 Da
Isoelectric point
9,45115
Sequence
MLKVTIPLIILFATIIPMKSFKQYLIEGNQNSQQIKCDINGICKVVKAYESAGNEEKVLGVYKDSKGLPTIGHGHLITKESEKIFGETFPEEQKKDPGFARNVLSGKGRLTPEQADKLLERDVRVRLPIVKKLAPDFENYSPELQAELASETFRGMTGKSPKAMEYLRAGKYEDAAKEYLNAREYRESMKQKSGIAPRMEKLASAIRTEGQRKAKAQAASAQTTQAPR
Other Proteins in cluster: phalp2_31984
Total (incl. this protein): 114 Avg length: 221,2 Avg pI: 9,23
Protein ID Length (AA) pI
55Yxp 228 9,45115
162zh 214 9,35954
1672M 263 9,56474
19BcC 330 8,77526
19I5U 243 9,59272
19QNh 230 9,24227
19Vm8 297 8,54988
19z1N 208 9,21158
1AGub 207 8,68204
1Km3l 221 6,21429
1Szgi 187 9,52071
1TrnR 187 9,52071
1TwW0 187 9,50092
1Wq3Y 187 9,39609
1gUJ5 198 9,17786
1iKXK 227 9,19269
1iMAc 235 9,71566
1jjDP 243 9,47016
1wJcZ 189 9,09592
1zEsp 211 9,26767
1zeWe 277 9,19276
2hLqc 230 9,29990
2xXj1 187 9,33581
30PFq 229 8,94926
34gaM 226 9,61444
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_2923
Quxe
 66 33,5% 191 5.547E-39
2 phalp2_18273
4UjCp
 8 32,7% 186 1.127E-36
3 phalp2_39945
1xyPq
 194 33,3% 171 7.037E-33
4 phalp2_20206
81gIU
 77 32,9% 188 2.961E-31
5 phalp2_31782
4c4WR
 2 29,1% 137 2.961E-31
6 phalp2_30621
6CSYi
 90 37,9% 153 4.878E-30
7 phalp2_23039
48FlL
 5 32,7% 180 6.486E-25
8 phalp2_25873
5ycsp
 59 30,2% 172 4.155E-24
9 phalp2_29659
8n15k
 1 28,6% 164 4.279E-22
10 phalp2_1774
2Rt7D
 1 28,0% 189 4.279E-22

Domains

Domains
Unannotated
Representative sequence (used for alignment): 55Yxp (228 AA)
Member sequence: 1Vrgb (187 AA)
1 228 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (55Yxp) rather than this protein.
PDB ID
55Yxp
Method AlphaFoldv2
Resolution 87.00
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50