Protein

Protein accession
1cBaD [EnVhog]
Representative
3ibqX
Source
EnVhog (cluster: phalp2_8936)
Protein name
1cBaD
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MAKVYKKGSRGESVQLLQRLLLQRGYQLTADGEYGARTVAAVTAFQQAEHLTADGMAGQKTLARLTGVTLTEAHIRQHITFAPGREVKYIAIHYTAGASSRRGAAMTNRNVFMQRPASADFVVDDEQTVLVNPDIDSYYCWAVGDKRNPWTGGARLSGKAVNRNTVSIEMCSTLAKGTSAAAPNHEGWTLSDRVVDRTLRLVRFLMMAYDIPRERVIRHYDVTGKLCPGVSGWNDGPLFDTAGKQTTRKNDSHRWAEFVAGI
Physico‐chemical
properties
protein length:262 AA
molecular weight:28919,5 Da
isoelectric point:9,58
hydropathy:-0,36
Representative Protein Details
Accession
3ibqX
Protein name
3ibqX
Sequence length
259 AA
Molecular weight
28394,10620 Da
Isoelectric point
9,29861
Sequence
MRTLKKGMSCDEVKTLQRALGVNDDGIFGVMTEGAVKDFQRSRQLIADGIVGAKTWAALGVTENKCVDPSVVYLPLSIHVTRLPGRSIKYLAIHYTAGSSSDAGRARGVKHVFESRKASADFAVDDKEIVQFNPDIRNYYCWAVGDKKAAGSIADAYNRNTISIEICSTLAKGTSASVPNHEGWSFTDEAVTNAVRLARLLMRKYGIPIERVVRHYDISGKMCPGIPGWNDGVLYTTSGVKTGKRSDESEWLKFKARLA
Other Proteins in cluster: phalp2_8936
Total (incl. this protein): 105 Avg length: 262,6 Avg pI: 9,22
Protein ID Length (AA) pI
3ibqX 259 9,29861
1NB1x 264 9,32569
1Nxxc 261 6,25038
1Ny1r 272 8,91761
1cLQw 273 9,53902
1kvjo 257 9,21841
1kvwZ 269 9,31151
21AYV 258 9,53334
21F64 262 9,86858
21fxV 259 9,29848
21gZr 266 9,47287
21nmD 259 6,99804
23eai 261 9,49672
24DsC 286 9,57937
24I8J 204 9,31241
24JFh 267 8,94146
24qLZ 262 9,85691
2VhSC 265 9,40441
2Vlzx 261 9,23434
3PGJr 260 9,64584
3WEGh 258 9,83699
3WGj1 261 9,11926
3WMr7 258 9,53405
3ZCcx 260 9,51510
3ZU75 257 9,47210
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_25083
1gD0p
 1 40,4% 205 2.016E-59
2 phalp2_38909
238Ru
 1 42,7% 166 2.350E-49
3 phalp2_1605
81mMl
 270 38,8% 180 6.307E-44
4 phalp2_7116
2lzss
 1 37,6% 162 3.914E-40
5 phalp2_3793
5X3JD
 59 36,9% 173 1.204E-38
6 phalp2_29669
8sfID
 1005 34,3% 195 2.868E-35
7 phalp2_24299
3nIle
 36 33,1% 190 1.623E-33
8 phalp2_24292
3k9WX
 42 34,0% 176 7.981E-31
9 phalp2_23766
13ajC
 287 27,5% 229 1.561E-26
10 phalp2_6024
4Sh7e
 8 31,5% 187 3.382E-23

Domains

Domains
PG_1
Ami2
Representative sequence (used for alignment): 3ibqX (259 AA)
Member sequence: 1cBaD (262 AA)
1 259 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01471, PF01510

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (3ibqX) rather than this protein.
PDB ID
3ibqX
Method AlphaFoldv2
Resolution 94.13
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50