Protein

Protein accession
1dLPa [EnVhog]
Representative
7ykGZ
Source
EnVhog (cluster: phalp2_33495)
Protein name
1dLPa
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
LYTSNEKLHSRSGSPASDAELQQPDTCGSRGLISPCSTSTDQLPRHHAGLFHVWKDHPMTDDDFVRLFQRRAAEAGHDVGKADGIAGARTLAVLDAVLPPLVIISEPPAATGDNIPDAGDAKLKGVHNSLASVIRMASPRSPVPFTVTEGLRSKTRQAALVETGASKTMSSRHLTGHAVDLWPLDSKTLKPLPSGAAFKPGSYEARAASAALWADLRAISATVKAVAKEQGVQIEWGGDWGWDAPHFQLNRAAYPA
Physico‐chemical
properties
protein length:256 AA
molecular weight:27205,3 Da
isoelectric point:7,31
hydropathy:-0,31
Representative Protein Details
Accession
7ykGZ
Protein name
7ykGZ
Sequence length
189 AA
Molecular weight
20524,33260 Da
Isoelectric point
9,75892
Sequence
MTRENMRLVQTGLKGLGHDPGPLDGIWGARTEGAAVALIRARSPAVVLPVPDPVPAIVADWRVFDAADKTQGLHPKLLAVLVHAAQRSDVGFDVIEGVRTAARQRQLVAQGASKTLNSRHLTGHAADLWPIDPATGQRATIDDKLLWALLRRIAAHVKASAKDLGVMIEWGGDWGWDAPHFQLNRKQFP
Other Proteins in cluster: phalp2_33495
Total (incl. this protein): 86 Avg length: 187,3 Avg pI: 9,08
Protein ID Length (AA) pI
7ykGZ 189 9,75892
13NQl 192 10,07417
1HIYZ 160 8,73677
1IHyu 184 8,98485
1Lr1G 183 8,70892
1MCVM 185 9,34626
1bEtR 234 9,09941
1cxRH 217 9,69239
1czn1 160 9,03932
1kH9d 163 9,01308
1qptt 234 9,41234
2Kbzo 191 10,44157
35fce 179 9,22144
3c2PT 214 8,67043
3hsNu 193 10,29252
3hu0Z 192 10,12729
3mY4n 191 10,44157
3n0ME 193 10,22670
4FHKI 182 8,59062
4WKS3 193 10,07417
4cKv9 224 9,27921
4mMc8 180 9,90468
4n1hM 231 9,42549
51MDc 186 9,63952
53Pid 186 9,63952
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_26018
6REqE
 256 47,2% 127 1.421E-56
2 phalp2_13949
8Fkan
 8452 46,4% 127 6.866E-56
3 phalp2_1400
1mRwO
 571 40,0% 155 7.256E-47
4 phalp2_15106
eKg9
 268 38,5% 140 8.991E-46
5 phalp2_28914
5wnp3
 97 39,5% 149 2.862E-44
6 phalp2_27432
4Rvdx
 79 38,1% 139 4.893E-40
7 phalp2_15082
1DVW
 42 35,5% 121 1.130E-32
8 phalp2_18798
1dhYs
 557 27,6% 170 3.398E-25
9 phalp2_39457
4Vk4k
 102 25,4% 153 6.076E-22
10 phalp2_26217
lr4C
 1 34,1% 123 8.297E-22

Domains

Domains
Unannotated
PET_M15
Representative sequence (used for alignment): 7ykGZ (189 AA)
Member sequence: 1dLPa (256 AA)
1 189 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF13539

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1dLPa
Method AlphaFoldv2
Resolution 75.75
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (7ykGZ) rather than this protein.
PDB ID
7ykGZ
Method AlphaFoldv2
Resolution 81.07
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50