Protein

Protein accession
1dM3I [EnVhog]
Representative
6crLy
Source
EnVhog (cluster: phalp2_33303)
Protein name
1dM3I
Lysin probability
99%
PhaLP type
endolysin
Probability: 99% (predicted by ML model)
Protein sequence
MQQPGINNQNRRDISHRSRAGRVIRPXXXAFDFFRNDGQGAYNESGNFFNKVGAIGVSLGLEWGGNWKSPVDKPHFQLPDWGSSTAGIKKVYANPDEFKNTWTAEIPKEKKSGWKQEDNGWRFYLGDTGECVRNNWYHDIEKNLWYWFDGAGIMITNTWYQYKGSWYYLGSDGAMLKGLQDVNDKWYYLDKDGKMATDPVILTPGQDGALQYPGLAE
Physico‐chemical
properties
protein length:217 AA
molecular weight: Da
isoelectric point:6,32
hydropathy:
Representative Protein Details
Accession
6crLy
Protein name
6crLy
Sequence length
312 AA
Molecular weight
35896,41790 Da
Isoelectric point
8,73445
Sequence
MMDNYYLLAYRHYIICRNSFQYTKNAKFDHVKHCMVFFHIIIKKGDKPMRDITLCHPRLQKIAAAWIKACAVEGITVAISETLRTAAEQDALYAQGRTKPGNIVTNAKGSSYKSQHQWGIAFDFYLKMDVDGDGKISDDAYNDSKGHFKRAAEIGKKLGLAWGGDWSSIVDKPHLYLPDWGSTPTPLIQQFKTPEQFMKTWVPEQVKTGWQQENGGWRFYLKYGSGKYVSNDWYKDGDKWYWFDGAGMMVHDTWYQYKGSWYYLGSDGAMLKGLQTISGKWYYLDQTGRMATEPVVLTPDQDGALHYLGLEK
Other Proteins in cluster: phalp2_33303
Total (incl. this protein): 183 Avg length: 257,8 Avg pI: 6,63
Protein ID Length (AA) pI
6crLy 312 8,73445
13xZj 246 6,40669
1c13e 266 6,43192
1dM6D 251 5,48976
1dMds 247 5,81022
1m2rg 264 6,10618
1mrDW 247 5,54649
1oiqg 264 5,56092
2dgDp 272 8,47451
2dhZ0 272 7,58325
2dhZf 247 5,53881
2l3Sz 272 8,19034
2m5Fd 202 9,37978
2mBH0 246 6,82690
2mC5B 264 6,59198
2my9F 264 6,15648
3bVoS 259 5,26940
3jUMU 246 5,77742
3k0Ls 272 5,86996
3kVKe 246 6,82690
3kVoV 246 5,78208
3kzrg 272 6,82741
3l17E 286 7,63037
3lH6A 289 6,58840
3lSXr 289 6,30796
Similar Clusters

No similar clusters were found for representative 6crLy.

Domains

Domains
PET_M15
Choline_bind_3
Representative sequence (used for alignment): 6crLy (312 AA)
Member sequence: 1dM3I (217 AA)
1 312 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF13539, PF19127

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1dM3I
Method AlphaFoldv2
Resolution 82.41
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (6crLy) rather than this protein.
PDB ID
6crLy
Method AlphaFoldv2
Resolution 82.39
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50