Protein

Protein accession
1dX0m [EnVhog]
Representative
5BeBs
Source
EnVhog (cluster: phalp2_25884)
Protein name
1dX0m
Lysin probability
99%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
VKYEGKVPHFYLDPSGLVTIGIGCRVATIHEALQLDFLYKDSKLPAERDSIRNDFIIVSQSISGQDTSYYDLLTNLFLSEEDIVKLFIVKYLEKLHYTKTYFADFDSFSDNIKLALLDMTFNLGVTGLIMKFPKFTKALQRKDWMAAAAECDRHGISAERNSFVRNTFLNEA
Physico‐chemical
properties
protein length:172 AA
molecular weight:19682,3 Da
isoelectric point:5,81
hydropathy:-0,09
Representative Protein Details
Accession
5BeBs
Protein name
5BeBs
Sequence length
189 AA
Molecular weight
20806,46180 Da
Isoelectric point
6,04133
Sequence
MADFDDYFEDLESHEGCTTWLYCDSRGFVTIGIGNLVASPSACAKLPFRRSSGKIASVDEKYGAWARVNDAFDKAKSAAYYRGLTNLRLTDAFVHALVAHRLEAEFIPGVTRLCPGFANFPLPARRALVDMAYNLGVGGLGMFPHMLAACNAGDWEMAAHQCHRSTCRDMRNAWTAQMFIDADATPNVL
Other Proteins in cluster: phalp2_25884
Total (incl. this protein): 110 Avg length: 193,5 Avg pI: 6,13
Protein ID Length (AA) pI
5BeBs 189 6,04133
15IZb 177 5,38870
1IfZd 190 4,94433
1Ig9z 177 8,04380
1OuO 184 4,51094
1fcDR 216 6,75653
1fcIW 215 6,75653
1fw6j 204 6,12533
1fwww 204 6,12533
1lMjg 190 4,30654
1nFFq 204 5,46816
1oEqA 162 5,88780
1q8fv 176 7,72359
22SHS 186 5,03027
24PLk 188 9,81062
25nOM 169 10,05276
2G3Lp 210 7,81217
2GvEP 194 4,67173
2T0HG 213 6,91846
2TgB7 186 6,70236
2jssR 201 6,09146
2oSg6 198 6,29375
325Jo 189 5,41576
35qec 263 6,64967
36mXB 201 9,13596
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_34639
5tgAm
 3 34,1% 196 5.644E-54
2 phalp2_39369
4ETfA
 5 36,5% 175 2.515E-49
3 phalp2_13770
6TzDt
 7 34,8% 201 7.256E-47
4 phalp2_11473
lI3R
 94 34,5% 188 5.368E-44
5 phalp2_10240
10nPC
 5 25,8% 178 2.362E-36
6 phalp2_15001
6Wx9A
 4 29,4% 170 1.130E-32
7 phalp2_21787
48mwx
 1 19,3% 202 5.964E-30
8 phalp2_18303
59P4S
 1 22,7% 167 3.812E-26
9 phalp2_23089
4pFbt
 6 21,2% 193 1.968E-23
10 phalp2_14761
6RP3o
 2 29,6% 162 3.673E-23

Domains

Domains
Unannotated
Representative sequence (used for alignment): 5BeBs (189 AA)
Member sequence: 1dX0m (172 AA)
1 189 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1dX0m
Method AlphaFoldv2
Resolution 94.78
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50
The structures below correspond to the cluster representative (5BeBs) rather than this protein.
PDB ID
5BeBs
Method AlphaFoldv2
Resolution 95.22
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50