Protein

Protein accession
1deil [EnVhog]
Representative
6JmE3
Source
EnVhog (cluster: phalp2_17635)
Protein name
1deil
Lysin probability
97%
PhaLP type
endolysin
Probability: 98% (predicted by ML model)
Protein sequence
MNKTMKLVALGAAFLFGTTLVSDHTVHADTPRTDMVDVSNHNGQMTTPEFVDMRNNHGVKSIVTKISEGTTYHDWTAAGNIRAAQEAGLYINGYHYLHATTVAGAIAEADYAVAMAQADGLPVGAVLVADVEEPAQMAMGANMQAVVTAFENEVQIKGGFRTTAYTMGSHLEVTPYGEKSWIASYPYTPTSTQNYYSTEHAWQWGSNGYFPMSLGRFDVNQLYDNFFTADQAVINKNLGDGATVWSKNGIWYTDKSFKHKVNGIKKHMGSYWSFANGKLIKSNWTNSWGLHYWSDGDGKLVQGEGDWHGYHFNFGTDGTFNAKSATVNNLADIIKLKN
Physico‐chemical
properties
protein length:338 AA
molecular weight:37218,0 Da
isoelectric point:6,03
hydropathy:-0,36
Representative Protein Details
Accession
6JmE3
Protein name
6JmE3
Sequence length
383 AA
Molecular weight
41954,84590 Da
Isoelectric point
9,87238
Sequence
LNKHKLKALILTVGAIFMAFLMVNVTSQAARMDMVDVSNNNGYMSTAEYTSMRNEFGVKALTVKVSEGTTFKDGYAASNIANGQAAGLYVNGYHFAHYKTKAQAIAEADFAGKTAKAAGLPVGAVLATDVESQEANNQSKATNDRNNAAFMKEIQTFGYRADIYTSGSWANNKMTIKGKIGWIAAYPYVVNGKNWYSTNHAWQWSSTAKFRISYGGFDVSQLNSNYYTAGQKSTVKPTNKGAVKANNQKNYRSYASAKWVKETKTYTLKTAVKLRTGASMSSNTITILPAGTTIKTNQAIIQGGYRWVRQPRFNGYGYLATGPASNTLEYVKSGVTHTYYTVKSGDSWWTIAQHNGLSMTTLASQNGKSIYTTIYPGQRLVVR
Other Proteins in cluster: phalp2_17635
Total (incl. this protein): 482 Avg length: 357,1 Avg pI: 8,73
Protein ID Length (AA) pI
6JmE3 383 9,87238
1FRwY 369 5,32203
1FVSS 305 8,46478
1QQg5 388 9,76201
1b4BV 351 9,67756
1bU7s 334 5,46066
1bsNy 338 6,12033
1deas 339 6,50292
1deiW 334 5,66835
1gRNb 326 6,08702
1gRv8 325 5,55353
1gRwL 338 5,80704
1jDUZ 310 8,94636
1jrln 376 9,93395
1lY1R 378 9,70219
1onWS 368 5,30503
1oogD 374 5,04988
1os9Q 374 4,82662
28AvM 350 9,93505
290vP 305 4,93109
3jHIe 368 5,95385
3kWHI 315 5,64283
3kWt8 312 5,98670
3kbNA 372 5,00157
3m0df 350 9,89643
Similar Clusters (pHMM search)
# Cluster # Members Identity (%) Alignment Length E-value
1 phalp2_38217
7u45O
 5 66,1% 266 6.562E-103
2 phalp2_30714
7hCUl
 46 57,3% 232 2.529E-86
3 phalp2_37990
5tY12
 7 47,2% 250 3.366E-65
4 phalp2_21701
3ifCN
 920 25,2% 404 1.032E-56
5 phalp2_25839
5j1l4
 12 28,0% 282 6.607E-56
6 phalp2_38172
72d4D
 103 28,7% 292 2.452E-49
7 phalp2_32213
71T7l
 9 24,5% 408 2.452E-49
8 phalp2_39679
5kP
 52 28,7% 393 3.915E-48
9 phalp2_9283
7cTgF
 101 28,2% 354 7.244E-48
10 phalp2_387
7iNag
 20 23,2% 396 9.899E-46

Domains

Domains
GH25
Unannotated
LysM
Representative sequence (used for alignment): 6JmE3 (383 AA)
Member sequence: 1deil (338 AA)
1 383 AA (representative)
Domain positions follow the representative sequence above; the member sequence bar is scaled to the same axis.
Legend: EAD CBD Linker Disordered Unannotated
Pfam accessions: PF01183, PF01476

Taxonomy

  Name Taxonomy ID Lineage
Phage Unknown from Metagenome
[NCBI] 		UNKNOWN_ENVHOG No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available for this protein.

The structures below correspond to the cluster representative (6JmE3) rather than this protein.
PDB ID
6JmE3
Method AlphaFoldv2
Resolution 82.90
Chain position -
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50